Protein Model on 8tie_C_1_D_1
(TEMPLATE: 
8tie
)Protein Model on 8tie_C_1_D_1
(TEMPLATE: 8tie
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(NUP98_HUMAN) | C 1 (c) | polymer(polypeptide(L)) [610 aa] | NUP145 isoform 1 :A0A8H4C085_YEASX | |
| 2 | b | D 1 (d) | polymer(polypeptide(L)) [286 aa] | Protein transport protein SEC13 :SEC13_YEAST | 1513R 1514S(Q) 1550A(F) 1554G(A) 1557E 1558S(F) 1576G(K) 1580K(D) 1583R(K) 1584E(R) 1589H(E) 1622V(L) 1623R(K) 1625H(R) 1626M(Y) 1627E 1652R(T) (identity: 17.6 %/24.9 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:8tie_C_1 identity=24.9% |
queryA 1301:ERRRAFSRWLSCTATPQIEEEVSLTQKNSPVEAVFSYLTGKRISEACSLAQQSGDHRLALLLSQFVGSQS--VRELLTMQLVDWHQLQADSFIQDERLRI:1398
:** * * *** * * ** * ** * * * * ** * * ** * * *:
8tie_C_1 869:ERHCRLTSWIVSQIGPEIEEKIR--NSSNEIEQIFLYLLLNDVVRASKLAIESKNGHLSVLIS-YLGSNDPRIRDLAELQLQKWST--GGCSIDKNISKI: 963
SecStr :HHHHHHHHHHHHHSHHHHHHHHH--H HHHHHHHHTTTT HHHHHHHHHHTT HHHHHHHT-T S HHHHHHHHHHHHHHHH--HSS HHHHHH:
ExpBur :bbbeebbebbbeebbeebeeebe--ebeeeeebbebbbbbebeeebeebbeebebeebbeebe-eeeebeeebbeebeeebeeeee--eeeeeeeeebbe:
queryA 1399:FALLAGKPVWQLSEKKQINVCSQLDWKRSLAIHLWYLLPPTASISRALSMYEEAFQNTSDSDRYACSPLPSYLEGSGCVIAEEQNSQTPLRDVCFHLLKL:1498
: ** * * * * * * * * * * * * * * * **:
8tie_C_1 964:YKLLSGSPFEGLFSLKELE--SEFSWLCLLNLTLCYGQIDEYSLESLVQSHLDKFSLPYDD------PIGVIFQ----LYAANENTE-----------KL:1040
SecStr :HHHHHT STTSSS GGGG--GTS HHHHHHHHHHTTTSSSS HHHHHHHHHHHS TT ------HHHHHHH----HHHTTT HH-----------HH:
ExpBur :bbbebeebbebeeebeebe--eebebbbbbbbbbbbbbbeeeebbebbebbbebbebeeeb------ebbbbbb----bbbbeeebe-----------eb:
queryA 1499:YSDRHYDLNQLLEPRSITADPLDYRLSWHLWEVLRALNYTHLSAQCEGVLQASYAGQLESEGLWEWAIFVLLHIDNSGIREKAVRELLTRHCQLLETPES:1598
:* * * * ** * * ** * * *** * ** * * * ** :
8tie_C_1 1041:YK----------EVRQRT-NALDVQFCWYLIQTLRFNGTRVFSKETSDEATFAFAAQLEFAQLHGHSLFVSCFLNDDKAAEDTIKRLVMREITLLRA---:1126
SecStr :HH----------HHHTT - HHHHHHHHHHHHTTTSS TTHHHHHHHHHHHHHHHHT SHHHHHHHTT HHHHHHHHHHHHHT SGGGSS---:
ExpBur :ee----------ebeeee-eeebebbbbbbbbbbbeeeebebbeeebbebbeebbebbbebebebbbbbbbbbbbeeebbeebbeebbeeebeebee---:
Contact : bb b b bb b b bb b
queryA 1599:WAKETFLTQKLRVPAKWIHEAKAVRAHMESDKHLEALCLFKAEHWNRCHKLIIRH------LASDAIINENYDYLKGFLEDLAPPERSSLIQDWETSGLV:1692
: * * * * * * * * * * * * * ** * * *:
8tie_C_1 1127:-STNDHILNRLKIPSQLIFNAQALKDRYEGNYLSEVQNLLLGSSYDLAEMAIVTSLGPRLLLSNNPVQNNELKTLREILNEFPDSERDK----WSVSINV:1221
SecStr :-SSHHHHHHHTTS HHHHHHHHHHHHHHHT HHHHHHHHHHTT HHHHHHHHHSSS TTSSSS TTT TTHHHHHHTSSSS SSSGGG----S SSHHH:
ExpBur :-eeebeebbeeebeeebbeebbbebbeeeeeeeebbebbbebeeeeebbebebeebbbeebeebeeeeeeebeebbeebeebeeeebee----bbebbeb:
Contact : bb bbb b
queryA 1693:YLDYIRVI:1700
: * :
8tie_C_1 1222:FEVYLKLV:1229
SecStr :HHHHHHHH:
ExpBur :bbebbebb:
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[assembly_id:1]
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