Protein Model on 7vop_F_1_U_1 (TEMPLATE: 7vop )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)		 type description a(query A)
1 a A(NUP98_HUMAN) F 1 (F) polymer(polypeptide(L)) [638 aa] Nuclear pore complex protein Nup96 :A0A1B8XZT4_XENTR
2 b U 1 (U) polymer(polypeptide(L)) [654 aa] Nuclear pore complex protein Nup93 :NUP93_XENLA 1501D(E) 1502R 1503H(Q) 1504Y 1505D 1507N(C) 1508Q 1536N 1537Y 1538T 1539H 1540L 1544C(R) (identity: 69.2 %/62.8 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:7vop_F_1 identity=62.8%
queryA      1131:LLMDMALFMGRSFRVGWGPNWTLANSGEQLNGSHELENHQIADSMEFGFLPNPVAVKPLTESPFKVHLEKLSLRQRKPDEDMKLYQTPLELKLKHSTVHV:1230
                :*  ** *****************   *  *      *     *    **** *   * ********* ***** *     *   *  ***  ** ***  :
7vop_F_1     239:LMIDMGLFMGRSFRVGWGPNWTLVHNGDKLSERLNAEEDRDMDTIDYGFLPKPTSAKSLTESPFKVHVEKLSLEQKT--KDLQSYLLPLEIELKNSTVDK: 336
SecStr          :  S  S   S S   EEETTTEEEEES  TTT  SS   SS SSSS      GGGT  SSS    EEEEE   S  S--SHHHHHHHHHHHHHHHS    :    
ExpBur          :eeeeeeeeeeeeeeeeeeeeebeebbeebeeeeeeeebeebbeeeeeeeeeeeeeeeeeeeeeeeebebeeeeeeee--eeeebbeebbeebbeebebee:    

queryA      1231:DELCPLIVPNLGVAVIHDYADWVKEASGDLPEAQ-IVKHWSLTWTLCEALWGHLKELDSQLNEPREYIQILERRRAFSRWLSCTATPQIEEEVSLTQKNS:1329
                :   **   ** **  ***** **   *    *    ** * ******* *** ****   * ** **   **** *** **  **   *******     :
7vop_F_1     337:SGPCPHFRPNPGVTAIHDYAGWVRNFSSEAAEVEAVVKQWGLTWTLCESLWGQLKELEASLDEPNEYVKNLERRKAFSHWLAQTAQERIEEEVSLYGPER: 436
SecStr          : SSS        GGGHHHHHHHHHHHHHH S   HHHHHHHHHHHHHHHHTS  S S SSS    HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH  SS :    
ExpBur          :eeebbbbeeeebeebbeebbebbeeebeebeeeebbbebbbbbbebbbbbebebeeeeeeeeeeeeeeeeeebbeebbebbeebbeeebeeeeeebbeee:    

queryA      1330:PVEAVFSYLTGKRISEACSLAQQSGDHRLALLLSQFVGSQSVRELLTMQLVDWHQLQADSFIQDERLRIFALLAGKPVWQLSEKKQINVCSQLDWKRSLA:1429
                :  ********* *** ** *** ****** ***** **** ** * * *****  ** *  ** **** * ** * ***  *    *********** * :
7vop_F_1     437:HIEAVFSYLTGGRISDACRLAQKSGDHRLSLLLSQMVGSQEVRDLITLQLVDWNKLQVDHYIQEERLRVFCLLSGTPVWRSSDNRSINVCSQLDWKRTLG: 536
SecStr          :SHHHHHHHHHH SSHHHHHHHHHHS SHHHHHHHS TT  SHHHHHHHHHHHHHHTT    S TTTS  STTS        SS    SSSSSS HHHHHH:    
ExpBur          :eeebebbbbbbbeeebbeebbeeeeeeeebeebbeeeebeeebeeebeebeeebeeeeeeeeeeeeebeebbbbbbebebeeeebebbbbbebbbbbbeb:    

queryA      1430:IHLWYLLPPTASISRALSMYEEAFQNTSDSDRYACSPLPSYLEGSGCVIAEEQNSQ--TPLRDVCFHLLKLYSDRHYDLNQLLEPRSITADPLDYRLSWH:1527
                :***** *****    ** *** ***       *** *** ***  *               **** ******* * *** *** * * * **********:
7vop_F_1     537:IHLWYMLPPTATVAQALHMYEQAFQEQEGGEPYACYPLPPYLEDCGFSFGDDPSAKFISLQRDVCVHLLKLYSERQYDLCQLLDPSSATPDPLDYRLSWH: 636
SecStr          :HHHHHTS TTS HHHHHHHHHHHHSGGGSS   S      SSSS SS SS  HHHHTTT    SHHHHHHHHH S S  SS S S  SSSSS   SHHHH:    
ExpBur          :bbebbbeeeeeebeebbeebeebbbeebeeebbbbbbbbbbeeeeeeeebebeeebeeebebbebbbbbbbeeeeeeebeeeebebbbbeeeebbbbbbb:    
Contact         :                                                        b                bbbbb bb                   

queryA      1528:LWEVLRALNYTHLSAQCEGVLQASYAGQLESEGLWEWAIFVLLHIDNSGIREKAVRELLTRHCQLLETPESWAKETFLTQKLRVPAKWIHEAKAVRAHME:1627
                : * ** ********    * * **** ***  *************     ** ****** ***     *** *** ** * *  ** *** *****    :
7vop_F_1     637:MWMVLQALNYTHLSGHRQGMLHASYAAQLENVGLWEWAIFVLLHIQDPHVREAAVRELLNRHCVVHDSPESLAKENFLIQRLCLPAQWIHKAKAVRSRRD: 736
SecStr          :HHHHHHHTT S S HHHHHHHHHHHHHHHHHHT SHHHHHHHTTS  SHHHHHHHHHHHHHHS SS  HHHHHHHHHHHHTS   HHHHHHHHHHHHHHH:    
ExpBur          :eebbbebeeebeeeeeebeebbeebbebbeeeeeebbbbbbbbbeeeeeebeeebeeebeebbeeeeeeebeeebeebeeebebbeebbeebbbeebeee:    
Contact         :        bbbbb   b                                                                                   

queryA      1628:SDKHLEALCLFKAEHWNRCHKLIIRHLASDAIINENYDYLKGFLEDLAPPERSSLIQDWETSGLVYLDYIRVIEMLRHIQQVDCSGNDLEQLHIKVTSLC:1727
                : *** *** * *   ** ****  **** ** ***** ** ***  ** **    ****** * ****** *****  * *  ***  ** ** ** ***:
7vop_F_1     737:GDKHKEALYLLKSHQWNQCHKLVTRHLAADAVINENYRYLRGFLGELARPEHCKHIQDWETAGKVYLDYISVIEMLNQIRQDECSGGELEKLHTKVMSLC: 836
SecStr          :  HHHHHHHHHHH  SHHHHHHHHHHHHHHHHHHT HHHHHHHHHHH  HHHHHHSSSHHHHHHHHHHHHHHHHHHHHHHHSS  HHHHHHHHHHHHHHT:    
ExpBur          :eeeeeebebebebeeeeebbeebeeebbbbbeeeeeeeebeebbeebeeeebbeebeebeebbebebbebebeebeeebeeeeeeeeeeeebeeebeebe:    

queryA      1728:SRIEQIQCYSAKDRLAQSDMAKRVANLLRVVLSLHHPPD:1766
                :   * ******* ***** ******* *******  ** :
7vop_F_1     837:KWVELIQCYSAKGRLAQSEMAKRVANILRVVLSLQQPPE: 875
SecStr          :TTTTTS   SHHHHHHHHHHHHHHHHHHHHHHHHHS   :    
ExpBur          :eeeeebeeeeeebeeebeebeeebeebeeebeeeeeeee:

Input Residue Numbers for Focused Sites

ex) 2,15,123