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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(NUP98_HUMAN) | F 1 (F) | polymer(polypeptide(L)) [687 aa] | Nuclear pore complex protein Nup96 :A0A1B8XZT4_XENTR | |
2 | b | U 1 (U) | polymer(polypeptide(L)) [820 aa] | Nuclear pore complex protein Nup93 :NUP93_XENLA | 1294R(N) 1501D(E) 1502R 1503H(Q) 1504Y 1505D 1506L 1508Q 1532L 1533R(Q) 1536N 1537Y 1538T 1539H 1540L 1541S 1544C(R) (identity: 70.6 %/64.0 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7vci_F_1 identity=64.0% |
queryA 1131:LLMDMALFMGRSFRVGWGPNWTLANSGEQLNGSHELENHQIADSMEFGFLPNPVAVKPLTESPFKVHLEKLSLRQRKPDEDMKLYQTPLELKLKHSTVHV:1230 :* ** ***************** * * * * **** * * ********* ***** * * * *** ** *** : 7vci_F_1 239:LMIDMGLFMGRSFRVGWGPNWTLVHNGDKLSERLNAEEDRDMDTIDYGFLPKPTSAKSLTESPFKVHVEKLSLEQKT--KDLQSYLLPLEIELKNSTVDK: 336 SecStr : SS EEEETTTEEEESS SGGGTSSS SS SSSS SSS SSS EEEE S S--STHHHHHHHHHHHHHHB B : ExpBur :eeeeeeeeeeeeeeeeebeeebeebeeebebeeeeeeeeebbeeeeeeeeeeeeeeeeeeeeeebebbbeeeeeeee--eeeeebebbbebbeebbeeee: queryA 1231:DELCPLIVPNLGVAVIHDYADWVKEASGDLPEAQ-IVKHWSLTWTLCEALWGHLKELDSQLNEPREYIQILERRRAFSRWLSCTATPQIEEEVSLTQKNS:1329 : ** ** ** ***** ** * * ** * ******* *** **** * ** ** **** *** ** ** ******* : 7vci_F_1 337:SGPCPHFRPNPGVTAIHDYAGWVRNFSSEAAEVEAVVKQWGLTWTLCESLWGQLKELEASLDEPNEYVKNLERRKAFSHWLAQTAQERIEEEVSLYGPER: 436 SecStr : SSS B B SSHHHHHHHHHHHHHHH TT HHHHHHHHHHHHHHHHT STTTSS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SSS: ExpBur :eeebbbbeeeeeeebbeebbeebeeeeeebeebeeebebbbbbbbbbbbbbbebeebeeeeeeeeeeeeeebbbebbeebbeebbeebeeebeeeeeeee: Contact : b queryA 1330:PVEAVFSYLTGKRISEACSLAQQSGDHRLALLLSQFVGSQSVRELLTMQLVDWHQLQADSFIQDERLRIFALLAGKPVWQLSEKKQINVCSQLDWKRSLA:1429 : ********* *** ** *** ****** ***** **** ** * * ***** ** * ** **** * ** * *** * *********** * : 7vci_F_1 437:HIEAVFSYLTGGRISDACRLAQKSGDHRLSLLLSQMVGSQEVRDLITLQLVDWNKLQVDHYIQEERLRVFCLLSGTPVWRSSDNRSINVCSQLDWKRTLG: 536 SecStr :HHHHHHHHHHHT HHHHHHHHHHTT HHHHHHHHHTT HHHHHHHHHHHHHHHHHTGGGGS HHHHHHHHHHHT SEEE TT EEE S HHHHHH: ExpBur :ebebbbbbbbeebeeebeeebeeeeeeeebeebeebeeeeebeeebeeebeeeeeeeebeeeeeeebbbebbbbeeebbebeeeeebebbeebbbbbbbb: queryA 1430:IHLWYLLPPTASISRALSMYEEAFQNTSDSDRYACSPLPSYLEGSGCVIAEEQNSQ--TPLRDVCFHLLKLYSDRHYDLNQLLEPRSITADPLDYRLSWH:1527 :***** ***** ** *** *** *** *** *** * **** ******* * *** *** * * * **********: 7vci_F_1 537:IHLWYMLPPTATVAQALHMYEQAFQEQEGGEPYACYPLPPYLEDCGFSFGDDPSAKFISLQRDVCVHLLKLYSERQYDLCQLLDPSSATPDPLDYRLSWH: 636 SecStr :HHHHHTS TTS SHHHHHHHHHHHS SSSS S HHHHTT S HHHHHSS HHHHHHHHHH SS GGG GGGSSSSS HHHHH: ExpBur :bbbbbeeeeeeebeebbeebeeebeeeeeeebebbbbbbbebeeeeebebeeeeebeeebeebbbbbbbebbeeeebebeebeebbbbbeeeebbbbbbb: Contact : bbbbbb b queryA 1528:LWEVLRALNYTHLSAQCEGVLQASYAGQLESEGLWEWAIFVLLHIDNSGIREKAVRELLTRHCQLLETPESWAKETFLTQKLRVPAKWIHEAKAVRAHME:1627 : * ** ******** * * **** *** ************* ** ****** *** *** *** ** * * ** *** ***** : 7vci_F_1 637:MWMVLQALNYTHLSGHRQGMLHASYAAQLENVGLWEWAIFVLLHIQDPHVREAAVRELLNRHCVVHDSPESLAKENFLIQRLCLPAQWIHKAKAVRSRRD: 736 SecStr :HHHHHHHTT HHHHHHHHHHHHHHHHHHT HHHHHHHHTS HHHHHHHHHHHHHHH HHHHHHHHHHHHTS HHHHHHHHHHHHHHH: ExpBur :bbbbbeeeeebeeeeeeeeeebeebbbbbeeeeebbbbbbbbbbeeeeeebeebbeebbeeebebeeeeeeeeeeeebeeebebeeebbbebbbeebeee: Contact : bb bbbbbb b queryA 1628:SDKHLEALCLFKAEHWNRCHKLIIRHLASDAIINENYDYLKGFLEDLAPPERSSLIQDWETSGLVYLDYIRVIEMLRHIQQVDCSGNDLEQLHIKVTSLC:1727 : *** *** * * ** **** **** ** ***** ** *** ** ** ****** * ****** ***** * * *** ** ** ** ***: 7vci_F_1 737:GDKHKEALYLLKSHQWNQCHKLVTRHLAADAVINENYRYLRGFLGELARPEHCKHIQDWETAGKVYLDYISVIEMLNQIRQDECSGGELEKLHTKVMSLC: 836 SecStr :T HHHHHHHHHHHT HHHHHHHHHHTHHHHHHHHT HHHHHHHHHHHTSHHHHHHSTTHHHHHHHHHHHHHHHHHHHHHHHS HHHHHHHHHHHHHHH: ExpBur :eeeebbbeebeeeeeeeebbeebeeebebebeeeeeeeebeebbebbbeeebbeebeebeeebebebebeebeeeeeebeeeeeeeeeeeebeeeeeeee: queryA 1728:SRIEQIQCYSAKDRLAQSDMAKRVANLLRVVLSLHHPPDRTSDSTPDPQRVPLRLLAPHIGRLPMPEDYAMDELRSLTQSYLRELAVGS:1816 : * ******* ***** ******* ******* ** *** * ********************* *** ********* **: 7vci_F_1 837:KWVELIQCYSAKGRLAQSEMAKRVANILRVVLSLQQPPESMSDSSSEP-RVPLRLLAPHIGRLPMPEDYALEELRGLTQSYLRELICGS: 924 SecStr :HHHTT SHHHHHHHHHHHHHHHHHHHHHHHHTS TTS SSSS - THHHHHHHHTTS HHHHHHHHHHHHHHHHHHHHT : ExpBur :eebbebeeeeeeeeebbeebeeeeeeeeeeeeeeeeeeeeeeeeeeee-eeebeeeeeeeeeeeeeeeebeeeeebeeeeeeebeeeee: |