Protein Model on 7tdz_AA_1_G_1
(TEMPLATE: 
7tdz
)Protein Model on 7tdz_AA_1_G_1
(TEMPLATE: 7tdz
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(NUP98_HUMAN) | AA 1 (F) | polymer(polypeptide(L)) [639 aa] | Nuclear pore complex protein Nup96 :A0A1L8HBE3_XENLA | |
| 2 | b | G 1 (G) | polymer(polypeptide(L)) [306 aa] | Protein SEC13 homolog :Q7ZYJ8_XENLA | 1143F 1144R 1145V 1146G 1147W 1148G 1149P 1153L 1154A(V) 1155N(H) 1156S(N) 1157G 1158E(D) 1159Q(K) 1160L 1195K 1196V 1197H 1198L(M) 1199E 1200K 1201L 1202S 1204R(E) 1507N(C) 1510L 1511E(D) 1519P 1520L 1522Y 1542A(E) 1543Q(H) 1544C(R) 1546G 1547V(T) 1551S 1554G(A) 1573D(P) 1574N(H) 1575S(P) 1576G(H) 1577I 1578R 1584E 1587T(N) 1588R 1622V(I) 1623R 1625H(R) 1626M(R) (identity: 56.0 %/60.7 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:7tdz_AA_1 identity=60.7% |
queryA 1143:FRVGWGPNWTLANSGEQLNGSHELENHQIADSMEFGFLPNPVAVKPLTESPFKVHLEKLSLRQRKPDEDMKLYQTPLELKLKHSTVHVDELCPLIVPNLG:1242
:*********** * * *** ***** * * *** ** * * ** ** *:
7tdz_AA_1 1:FRVGWGPNWTLVHNGDKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVHMEKLSLEQK--SRELQSYLMPLEIELKNSSVDRSAQCPHFKPNAG: 98
SecStr : EEETTTEEEESS ---------------------------------- EEEE --GGGHHHHHHHHHHHHHTEEEE SSSS EEEE SS:
ExpBur :eeeeeeeebebebeeeee----------------------------------eebeeeeebeee--eebeebbeebbebbbebbeeeeeeebbbbebeee:
Contact :bbbbbbb bbbbbbbb bbbbbbbb b
queryA 1243:VAVIHDYADWVKEASGDLPEAQ-IVKHWSLTWTLCEALWGHLKELDSQLNEPREYIQILERRRAFSRWLSCTATPQIEEEVSLTQKNSPVEAVFSYLTGK:1341
:** ***** ** * * ** * ******* *** **** * ** ** **** *** ** ** ******* ****** *** :
7tdz_AA_1 99:VAAIHDYAGWVRNLSNEAGELEAVVKQWGLTWTLCESLWGQLKELEASLDEPNEYVRNLERRKAFSHWLAHTAEERIEEEVSLYGPERHVEAVFSFLTGG: 198
SecStr :SHHHHHHHHHHHHHHHH SS HHHHHHHHHHHHHHHHHS HHHHS SS HHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTTTHHHHHHHHHTTT:
ExpBur :eebbeebbbbbeeeeeeeeeeeeebebbbebbbbbbbbbbebeebeeeeeebeeeeeeebbbebbeebbeebbeeebeebeeeeeeeebbbbbbbbbbbe:
queryA 1342:RISEACSLAQQSGDHRLALLLSQFVGSQSVRELLTMQLVDWHQLQADSFIQDERLRIFALLAGKPVWQLSEKKQINVCSQLDWKRSLAIHLWYLLPPTAS:1441
:*** ** *** ****** ***** **** *** ***** ** * ** **** * ** * *** * *********** ** **** ***** :
7tdz_AA_1 199:RISDACRLAQKSGDHRLSLLLSQMVGSQEMRELISLQLVDWNKLQVDHYIQEERLRVFCLLSGTPVWRSSDNRSINVCSQLDWKRTLAVHLWYMLPPTAT: 298
SecStr : HHHHHHHHHHTT HHHHHHHHT SS HHHHHHHHHHHHHHHHTT GGGS HHHHHHHHHHHT SEEE TTS EEETTTT HHHHHHHHHHTTS TT :
ExpBur :eeebbbeebeeeebeebbebbeebeeeeebeeebeeebeebeeeeebeeeeeeebbbbbbbbeeeebebeeeeebebbeebbbbbbbbbbbbbbbeeebe:
queryA 1442:ISRALSMYEEAFQNTSDSDRYACSPLPSYLEGSGCVIAEEQNSQ--TPLRDVCFHLLKLYSDRHYDLNQLLEPRSITADPLDYRLSWHLWEVLRALNYTH:1539
:* ** ** *** *** *** *** * **** ******* * *** *** * * * ************ ** ******:
7tdz_AA_1 299:IAQALRLYERAFQEHEEGEPYACYPLPPYLEDCSISLGDEPSAKFSSLQRDVCVHLLKLYSERQYDLCQLLDPSSVTPDPLDYRLSWHLWMVLQALNYTH: 398
SecStr :HHHHHHHHHHHHS BTTB S HHHHTS S HHHHTTS HHHHHHHHHH TT HHHHT GGGT S TT HHHHHHHHHHHHTT :
ExpBur :bbebbeebbebbeeeeeeeebbebbbbbeeeeeeeeeeeebeeebeebbebbbbbbbbbeeeeebebeebbebebbbeeeebbbbbbbbbbbbebbebee:
Contact : b bb bb b
queryA 1540:LSAQCEGVLQASYAGQLESEGLWEWAIFVLLHIDNSGIREKAVRELLTRHCQLLETPESWAKETFLTQKLRVPAKWIHEAKAVRAHMESDKHLEALCLFK:1639
:** * * **** *** ************* *** ***** * * * *** *** ** * *** * ***** * * * *** * *:
7tdz_AA_1 399:LSEHRQGTLHASYAAQLENVGLWEWAIFVLLHIPHPHIREAGVRELLNRQCVVRESPESLAKENFLIHRLCVPAQWVHEAKAIRSRRDGDRHKEALYLLK: 498
SecStr :S HHHHHHHHHHHHHHHHHHT HHHHHHHHTT SSHHHHHHHHHHHHHHH SS HHHHHHHHHHHHTS HHHHHHHHHHHHHHHT HHHHHHHHHH:
ExpBur :beeeebeebbebbbebbbbbebbbbbbbbbbbbeeeeebbebbeebbeebbebeeeeebeebbebbeeebbbeeebbbbbbbeebeeeeeeeebbebbbe:
Contact : bbb bb b b bbbbbb b bb bb bb
queryA 1640:AEHWNRCHKLIIRHLASDAIINENYDYLKGFLEDLAPPERSSLIQDWETSGLVYLDYIRVIEMLRHIQQVDCSGNDLEQLHIKVTSLCSRIEQIQCYSAK:1739
: ** **** **** ** ***** ** ** * ** ****** * ********* ** *** ** ** ** ** *** * * ** **:
7tdz_AA_1 499:GHQWNPCHKLVTRHLAADAVINENYRYLQSFLGELSNPEHCKHIQDWETAGKVYLDYIRVIDMLNLIQQDESSGCELEKLHTKVMSLCKWVELIHCYTAK: 598
SecStr :TT HHHHHHHHHHHTHHHHHHTT HHHHHHHHHHHTSHHHHTTSTTTTTTHHHHHHHHHHHHHHHHHHHTT HHHHHHHHHHHHHHHHHHTT SHH:
ExpBur :beebeebbebbbeebbbbbbeeeebebbeebbeebbeeebbeebeebeebbebbbbbbebbebbeebeeeeeeeeebeebbeebbebbeebeebeeeeee:
queryA 1740:DRLAQSDMAKRVANLLRVVLSLHHPPDRTSDSTPDPQRVPLRLLAPHIGRLPMPEDYAMDELRSLTQSYLRELAVGS:1816
:****** ******* ******* ** *** * ********************* *** ********* *:
7tdz_AA_1 599:DRLAQSEMAKRVANILRVVLSLQQPPESMSDSS-EP-RVPLRLLAPHIGRLPMPEDYALEELRGLTQSYLRELICDS: 673
SecStr :HHHHHHHHHHHHHHHHHHHHHHTS TT TT - - HHHHHHHHTTS HHHHHHHHHHHHHHHHHHHHH :
ExpBur :beebbbebbeebbebbeebbbeeeeeeeeeeee-ee-eeebeebeebbeebebeeebeeebeeebeeeeeeeeeeee:
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[assembly_id:1]
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