[pdbjlvh2]Protein Model on 7tbi_ZA_1_XA

Protein Model on 7tbi_ZA_1_XA_1 (TEMPLATE: 7tbi )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(NUP98_HUMAN)	ZA 1 (S1)	polymer(polypeptide(L)) [511 aa]	Nup145C
2	b		XA 1 (R1)	polymer(polypeptide(L)) [669 aa]	Nup84	1344S(V) 1347C(S) 1348S(K) 1351Q(I) 1353S 1354G(K) 1355D(N) 1356H(G) 1357R(H) 1358L 1359A(S) 1360L(V) 1361L 1363S 1365F(Y) 1368S 1369Q(N) 1370S(D) 1371V(I) 1374L 1375L(A) 1378Q 1382W 1388D(G) 1389S(C) 1390F(S) 1391I 1392Q(D) 1395R(I) (identity: 31.0 %/26.4 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:7tbi_ZA_1 identity=26.4%

queryA      1301:ERRRAFSRWLSCTATPQIEEEVSLTQKNSPVEAVFSYLTGKRISEACSLAQQSGDHRLALLLSQFVGSQS--VRELLTMQLVDWHQLQADSFIQDERLRI:1398
                :**      *      * ***           *  * **       *  **  *    *  * *   **     * *   **  *        *      *:
7tbi_ZA_1    173:ERHCRLTSWIVSQIGPEIEEKIR--NSSNEIEQIFLYLLLNDVVRASKLAIESKNGHLSVLIS-YLGSNDPRIRDLAELQLQKWST--GGCSIDKNISKI: 267
SecStr          :HHHHHHHHHHHHHHHHHHHHHHH--H   HHHHHHHHHHTT HHHHHHHHHHTT HHHHHHHT-TTTS  HHHHHHHHHHHHHHTT--T S   HHHHHH:    
ExpBur          :ebbeebbebbeeebbeebeeebe--ebeeebebbbbbbbbeeeeebeebbeebeeeebbeebe-ebeebeeeebeebeeebeeeee--eeeeeeebbbeb:    
Contact         :                                           b  bb  b bbbbbbbbb b b  bbb  b  bb  b   b     bbbbb  b   

queryA      1399:FALLAGKPVWQLSEKKQINVCSQLDWKRSLAIHLWYLLPPTASISRALSMYEEAFQNTSDSDRYACSPLPSYLEGSGCVIAEEQNSQTPLRDVCFHLLKL:1498
                :  ** * *   *   *     *   *   *   * *      *           *    *       *            *   *             **:
7tbi_ZA_1    268:YKLLSGSPFEGLFSLKELE--SEFSWLCLLNLTLCYGQIDEYSLESLVQSHLDKFSLPYDD------PIGVIFQ----LYAANENTE-----------KL: 344
SecStr          :HHHHHT SSSSSS GGGGG--GTS HHHHHHHHHHSTTTTTS HHHHHHHHHTT    TT ------HHHHHHH----HHHHGGGHH-----------HH:    
ExpBur          :bbbbbbebbeeeeebeebe--eebebbbbbbbbbbbbebeeeebeebbebbbeebebeeee------eebbbbe----bbbbeeebe-----------eb:    

queryA      1499:YSDRHYDLNQLLEPRSITADPLDYRLSWHLWEVLRALNYTHLSAQCEGVLQASYAGQLESEGLWEWAIFVLLHIDNSGIREKAVRELLTRHCQLLETPES:1598
                :*           * *  *   **    * *   **       *           * ***   *     **          *     *  *   **     :
7tbi_ZA_1    345:YK----------EVRQRT-NALDVQFCWYLIQTLRFNGTRVFSKETSDEATFAFAAQLEFAQLHGHSLFVSCFLNDDKAAEDTIKRLVMREITLLRA---: 430
SecStr          :HH----------HHHHH - SS HHHHHHHHHHHHHTSS    HHHHHHHHHHHHHHHHHTT HHHHHHHHTT S HHHHHHHHHHHHHHHTTTTSS---:    
ExpBur          :be----------ebeeeb-eebeebbbbbbbbbbebeeebebeeebbbebbeebbebbbebebbbbbbbbbbbbbeeebbeebbeebbeebbeebee---:    

queryA      1599:WAKETFLTQKLRVPAKWIHEAKAVRAHME:1627
                :          *  *   *  * *     *:
7tbi_ZA_1    431:-STNDHILNRLKIPSQLIFNAQALKDRYE: 458
SecStr          :-SHHHHHHHTTT  HHHHHHHHHHHHHHH:    
ExpBur          :-eebbeebbebebbeebbeebeeeeeeee:

Protein Model on 7tbi_ZA_1_XA_1 (TEMPLATE: 7tbi )

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