Protein Model on 7r5j_KB_1_EC_1
(TEMPLATE: 
7r5j
)Protein Model on 7r5j_KB_1_EC_1
(TEMPLATE: 7r5j
)| CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model]
[for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(NUP98_HUMAN) | KB 1 (M0) | polymer(polypeptide(L)) [673 aa] | Nuclear pore complex protein Nup96 :NUP98_HUMAN | |
| 2 | b | EC 1 (R0) | polymer(polypeptide(L)) [1399 aa] | Nuclear pore complex protein Nup160 :NU160_HUMAN | 1112R 1113R 1114Q 1115L 1116G 1117L 1118V 1122K 1123S 1124V 1125T 1131L 1132L 1133M 1134D 1135M 1136A 1137L 1140G 1660I 1661N 1738A 1739K 1741R 1793P 1794E 1795D 1798M 1806Q 1817L (identity: 100.0 %/95.3 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:7r5j_KB_1 identity=95.3% |
queryA 1112:RRQLGLVPREKSVTYGKGKLLMDMALFMGRSFRVGWGPNWTLANSGEQLNGSHELENHQIADSMEFGFLPNPVAVKPLTESPFKVHLEKLSLRQRKPDED:1211
:************************************************* ******************:
7r5j_KB_1 232:RRQLGLVPREKSVTYGKGKLLMDMALFMGRSFRVGWGPNWTLANSGEQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFKVHLEKLSLRQRKPDED: 331
SecStr : GGGSTTTT TT TT HHHHTTT EEETTTEEEESSS --------------------------------- EEEE SSS HHHH:
ExpBur :eeeeeeeeeeebeeeeeeeeeeeeeeeeeeeeeeeeeeeeebebeeeee---------------------------------eeeeebeeebeeeeeeee:
Contact :bbbbbbb bbbb bbbbbbb b
queryA 1212:MKLYQTPLELKLKHSTVHVDELCPLIVPNLGVAVIHDYADWVKEASGDLPEAQIVKHWSLTWTLCEALWGHLKELDSQLNEPREYIQILERRRAFSRWLS:1311
:****************************************************************************************************:
7r5j_KB_1 332:MKLYQTPLELKLKHSTVHVDELCPLIVPNLGVAVIHDYADWVKEASGDLPEAQIVKHWSLTWTLCEALWGHLKELDSQLNEPREYIQILERRRAFSRWLS: 431
SecStr :THHHHHHHHHHTTSEEEE SSSS EEEE SSSTHHHHHHHHHHHHTSS TTHHHHHHHHHHHHHHHHHTS SSSTT SS HHHHHHHHHHHHHHHHH:
ExpBur :bebbeebbebbbebbeeeeeeebbbbebeeeeebbeebbebbeebeeeeebeebbebbbbbbbbbbbbbbebeebeeeeeeeeeeeeebbbbebbbebbb:
queryA 1312:CTATPQIEEEVSLTQKNSPVEAVFSYLTGKRISEACSLAQQSGDHRLALLLSQFVGSQSVRELLTMQLVDWHQLQADSFIQDERLRIFALLAGKPVWQLS:1411
:****************************************************************************************************:
7r5j_KB_1 432:CTATPQIEEEVSLTQKNSPVEAVFSYLTGKRISEACSLAQQSGDHRLALLLSQFVGSQSVRELLTMQLVDWHQLQADSFIQDERLRIFALLAGKPVWQLS: 531
SecStr :HTTHHHHHHHHHHHTTT HHHHHHHHHHTT HHHHHHHHHHTT HHHHHHHHTTTT HHHHHHHHHHHHHHHHTT GGGS HHHHHHHHHHTT SEEE T:
ExpBur :ebbbeebeeebeebeeebebebbbbbbbbebbeebbebbeeeebeebbeebeebeeeeebbeebeeebeeeeeeeebeeeeeebbbbbbbbbeeeebebe:
queryA 1412:EKKQINVCSQLDWKRSLAIHLWYLLPPTASISRALSMYEEAFQNTSDSDRYACSPLPSYLEGSGCVIAEEQNSQTPLRDVCFHLLKLYSDRHYDLNQLLE:1511
:****************************************************************************************************:
7r5j_KB_1 532:EKKQINVCSQLDWKRSLAIHLWYLLPPTASISRALSMYEEAFQNTSDSDRYACSPLPSYLEGSGCVIAEEQNSQTPLRDVCFHLLKLYSDRHYDLNQLLE: 631
SecStr :TS EEETTTT HHHHHHHHHHTSS TTS HHHHHHHHHHHHS SSS SSGGGTTS SS S HHHHHHHHHH TTS SHHHHS:
ExpBur :eeeebebbeebbbbbbbbbbbbbbbeeeeebeebbebbbebbeeeeeeeebbebbebeeeeeeeeeeeeeeeeeeeebbbbbbbbebeeeeebebeebbe:
queryA 1512:PRSITADPLDYRLSWHLWEVLRALNYTHLSAQCEGVLQASYAGQLESEGLWEWAIFVLLHIDNSGIREKAVRELLTRHCQLLETPESWAKETFLTQKLRV:1611
:****************************************************************************************************:
7r5j_KB_1 632:PRSITADPLDYRLSWHLWEVLRALNYTHLSAQCEGVLQASYAGQLESEGLWEWAIFVLLHIDNSGIREKAVRELLTRHCQLLETPESWAKETFLTQKLRV: 731
SecStr :GGGT S TT HHHHHHHHHHTTTT S HHHHHHHHHHHHHHHHHTT HHHHHHHHTT S HHHHHHHHHHHHHHH SS HHHHHHHHHHHHTS :
ExpBur :bebbbebeebbbbbbbbbbbbbbbebeebeeeebeebbeebbbbbbbeebbbbbbbbbbbbeeeeebbeebeebbeebbebeeeeebeebbbbbeeebeb:
queryA 1612:PAKWIHEAKAVRAHMESDKHLEALCLFKAEHWNRCHKLIIRHLASDAIINENYDYLKGFLEDLAPPERSSLIQDWETSGLVYLDYIRVIEMLRHIQQVDC:1711
:****************************************************************************************************:
7r5j_KB_1 732:PAKWIHEAKAVRAHMESDKHLEALCLFKAEHWNRCHKLIIRHLASDAIINENYDYLKGFLEDLAPPERSSLIQDWETSGLVYLDYIRVIEMLRHIQQVDC: 831
SecStr : THHHHHHHHHHHHHTT HHHHHHHHHTT TTHHHHHHHHHHTHHHHHHTT HHHHHHHHHHH SHHHHTTSTT TTTHHHHHHHHHHHHHHHHHTTS :
ExpBur :eeebbbbbbbeebeeeeebeebbebbeebbeeeebbebbbeebbbebbeeeebeebbebbeebeeeeebeebeebeebbbbbbbbbebbebbeebeeeee:
Contact : bb
queryA 1712:SGNDLEQLHIKVTSLCSRIEQIQCYSAKDRLAQSDMAKRVANLLRVVLSLHHPPDRTSDSTPDPQRVPLRLLAPHIGRLPMPEDYAMDELRSLTQSYLRE:1811
:****************************************************************************************************:
7r5j_KB_1 832:SGNDLEQLHIKVTSLCSRIEQIQCYSAKDRLAQSDMAKRVANLLRVVLSLHHPPDRTSDSTPDPQRVPLRLLAPHIGRLPMPEDYAMDELRSLTQSYLRE: 931
SecStr : HHHHHHHHHHHHHHHHHHTT SHHHHHHHHHHHHHHHHHHHHHHHHHS TT TTSS HHHHHHHHTT HHHHHHHHHHHHHHHHHH:
ExpBur :eeeebeebeeebeebbebbeebeeeeeebeebbbebbeebbebbbebbbeeeeeeeeeeeeeeeeebeeeebeeebeebebeeeeeeebeeebeebeeee:
Contact : bb b bbb b b
queryA 1812:LAVGSL:1817
:******:
7r5j_KB_1 932:LAVGSL: 937
SecStr :HHTT :
ExpBur :eeeeee:
Contact : b
|
[assembly_id:1]
[help]