Protein Model on 7now_B_1_A_1
(TEMPLATE: 
7now
)Protein Model on 7now_B_1_A_1
(TEMPLATE: 7now
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DOWNLOAD: [sequence-replaced 3D model]
[for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(NUP98_HUMAN) | B 1 (B) | polymer(polypeptide(L)) [153 aa] | Nuclear pore complex protein Nup98 :A0A6I8SCP2_XENTR | |
| 2 | b | A 1 (A) | polymer(polypeptide(L)) [129 aa] | Anti-Nup98 nanobody MS98-27 | 797K 798E 799V 800V(I) 801V 802Y 803L(V) 805D 808K 823L 858K 859Q 860G 873W 875F 877V 879H 880F (identity: 88.9 %/72.8 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:7now_B_1 identity=72.8% |
queryA 730:HPAGIILTKVGYYTIPSMDDLAKITNEKGECIVSDFTIGRKGYGSIYFEGDVNLTNLNLDDIVHIRRKEVVVYLDDNQKPPVGEGLNRKAEVTLDGVWPT: 829
:******** ******* ** * ***** ***** * ******* ****** ** ********* ** ** *** ****** * **** *** :
7now_B_1 3:HPAGIILTRDSYYTIPSMEELARSVDENGECIVNGFTIGREGFGSIYFEGIVNLTNLDLDSIVHIRRKEVIVYVDDQNKPPLGEGLNRPAQVTLDEVWPI: 102
SecStr : TT B TTEEEES HHHHTT B TTS BEEEEEEEEETTTEEEEEEEEEE TT BHHHHEEEETTEEEE SSGGG TTSTT S EEEEESS E:
ExpBur :bebebebeeeebebeeebeebeeeeeeeeebebebbbbbbeebbbbebeeebebbebebbebbebeeeebebbeeeeeeeeeeeebbbebebbbeebbbe:
Contact : bbbbbbb b b b
queryA 830:DKTSRCLIKSPDRLADINYEGRLEAVSRKQGAQFKEYRPETGSWVFKVSHF: 880
:****** * ** ** ** ** ******** **** ******* **:
7now_B_1 103:DKTSRCMITSPERLSEMNYKSKLENASRKQGAQFVDYRPESGSWVFKVNHF: 153
SecStr :ETTTTEE HHHHHHTTHHHHHHHHHHHTT EEEEEETTTTEEEEEES :
ExpBur :eeeeeeeeeeeeebeeeebeeebeeebeeeebebeebeeeebbbbbebeee:
Contact : bbb b b b bb
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[assembly_id:1]
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