Protein Model on 5cww_A_1_B_1
(TEMPLATE: 
5cww
)Protein Model on 5cww_A_1_B_1
(TEMPLATE: 5cww
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(NUP98_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [140 aa] | Nucleoporin NUP145N :NU145_CHATD | |
| 2 | b | B 1 (B) | polymer(polypeptide(L)) [538 aa] | Nucleoporin NUP82 :NUP82_CHATD | 796R(P) 797K(R) 798E(S) 799V(A) 800V(T) 801V 802Y 803L(P) 804D(N) 805D(A) 808K 823L 826V(S) 828P 829T(R) 846I(R) 850G(R) 851R(H) 854A(R) 855V(L) 858K(I) 860G(D) 861A(T) 873W 875F 877V 880F (identity: 33.3 %/35.9 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:5cww_A_1 identity=35.9% |
queryA 740:GYYTIPSMDDLAKITNEKGECIVSDFTIGRKGYGSIYFEGDVNLTNLNLDD----IVHIRRKEVVVYLDDNQKPPVGEGLNRKAEVTLDGVWPTDKTSRC: 835
: * * ** * ** ** ** * * * * **** ** ** *** * *** * * ** :
5cww_A_1 6:AYWMSPTADDIRAMNRMQRQRVVG-FTVGRENVGSVQFKVPVDLSNINLDDLFGTIVILEPRSATVYPNAAKKPPMGKGLNVPALISLEHSWPRGGPT--: 102
SecStr : EEEES HHHHHTS TTGGGSBTT- EEEETTTEEEEESS B TTS GGG BTTTEEEETTEEEES SGGG TTSTT S EEEEETT S TT SS--:
ExpBur :ebebeeebeebeeeeeeeeeebee-bbbbeeebbbbebeeebebeebebeebeeebbebeeeebebbeeeeeeeeeeebbbbebebbbebbebeebee--:
Contact : bbbbbbbbbb b b b bb
queryA 836:LIKSPDRLADINYEGRLEAVSRKQGAQFKEYRPETGSWVFKVSHF: 880
: * * * * **** * * * **:
5cww_A_1 103:-------IKGRRLERHIERLKSIPDTTFESYDPETGVWAFSVEHF: 140
SecStr :------- THHHHHHHHHHHTSTT EEEEEETTTTEEEEEES :
ExpBur :-------beeeeeeebeeebeeeeebeeeebeeeebebbbbbeee:
Contact : b bb bb b bb b b b b
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[assembly_id:1]
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