Protein Model on 3tkn_C_1_A_1 (TEMPLATE: 3tkn )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(NUP98_HUMAN) C 1 (C) polymer(polypeptide(L)) [147 aa] Nucleoporin 98 :Q6PFD9_MOUSE
2 b A 1 (A) polymer(polypeptide(L)) [451 aa] Nucleoporin NUP82 :NUP82_YEAST 797K 798E 799V 800V(I) 804D 828P 829T 830D 831K 832T 834R 845D 846I 848Y 851R 855V 858K 859Q 873W 875F 877V (identity: 95.2 %/98.0 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:3tkn_C_1 identity=98.0%
queryA       734:IILTKVGYYTIPSMDDLAKITNEKGECIVSDFTIGRKGYGSIYFEGDVNLTNLNLDDIVHIRRKEVVVYLDDNQKPPVGEGLNRKAEVTLDGVWPTDKTS: 833
                :* **************************************************************** ** ******************************:
3tkn_C_1       6:IVLTKVGYYTIPSMDDLAKITNEKGECIVSDFTIGRKGYGSIYFEGDVNLTNLNLDDIVHIRRKEVIVYVDDNQKPPVGEGLNRKAEVTLDGVWPTDKTS: 105
SecStr          : B  STTEEEES TTHHHHS  TTS    EEEEEEETTTEEEEEEEE   TT BGGGTEEEETTEEEESSSSSS   TTSSS S EEEEE S   B TTT:    
ExpBur          :eebeeeebebebeeeebeeeeeeeeebebeebbbbeeeebbbebeeebebeeeebbebbbbeeeebebbeeeeeeeeeeebbbbebebbbbbbbbeeeee:    
Contact         :                                                               bbbb   b                       bbbbb 

queryA       834:RCLIKSPDRLADINYEGRLEAVSRKQGAQFKEYRPETGSWVFKVSHF: 880
                :***********************************************:
3tkn_C_1     106:RCLIKSPDRLADINYEGRLEAVSRKQGAQFKEYRPETGSWVFKVSHF: 152
SecStr          :  B   HHHHHHTTHHHHHHHHHHTTT EEEEEETTTTEEEEEES  :    
ExpBur          :eeebeeeeebeeeebebebeeebeeeebeeeebeeeebbbbbebeeb:    
Contact         :b          bb b  b   b  bb             b b b                                                        


Input Residue Numbers for Focused Sites

ex) 2,15,123