Protein Model on 3pbp_B_1_A_1
(TEMPLATE: 
3pbp
)Protein Model on 3pbp_B_1_A_1
(TEMPLATE: 3pbp
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(NUP98_HUMAN) | B 1 (B) | polymer(polypeptide(L)) [146 aa] | Nucleoporin NUP116/NSP116 :NU116_YEAST | |
| 2 | b | A 1 (A) | polymer(polypeptide(L)) [438 aa] | Nucleoporin NUP82 :NUP82_YEAST | 797K 798E(T) 799V(C) 800V(I) 801V(I) 821V(I) 826V(C) 830D 831K 832T(S) 833S(T) 834R 843L(Q) 844A(L) 850G(R) 854A(R) 855V(L) 875F 877V 879H (identity: 35.0 %/30.4 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:3pbp_B_1 identity=30.4% |
queryA 741:YYTIPSMDDLAKITNEKGECIVSDFTIGRKGYGSIYFEGDVNLTNLNLDD----IVHIRRKEVVVYLDDNQKPPVGEGLNRKAEVTLDGVWPTDKTSRCL: 836
:** ** * * * * * ** * * * * * * * * * *** * * * * ** * :
3pbp_B_1 5:YYISPSLDTLSSYSLLQLR-KVPHLVVGHKSYGKIEFLEPVDLAGIPLTSLGGVIITFEPKTCIIYANLPNRPKRGEGINVRARITCFNCYPVDKSTRKP: 103
SecStr :EEEES HHHHHHS SSTTS-SB S EEEETTTEEEEESS B TTS TTHHHHTSEEEETTEEEES SS TTSTT S EEEEES B TTT B:
ExpBur :bebeeeeeebeeeeeeebe-ebeebbbbbeeebebbbeeebebbebebebbbeebbbbeeeeeebbeeeeeebeeeeebbbebebbbeebbbeeeeeeee:
Contact : bbbbb b b bbbbb
queryA 837:IKSPDRLADINYEGRLEAVSRKQGAQFKEYRPETGSWVFKVSH: 879
:** * * * * * ** * *:
3pbp_B_1 104:IKDPNHQL---VKRHIERLKKNPNSKFESYDADSGTYVFIVNH: 143
SecStr : TTSHH---HHHHHHHHTS SSSEEEEE TTT EEEEES :
ExpBur :beeeeeee---beebeeebeeeeebeeeebeeeebebbbbbee:
Contact : bb b bb b b b
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[assembly_id:1]
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