Protein Model on 1ko6_A_1_C_1 (TEMPLATE: 1ko6 )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(NUP98_HUMAN) A 1 (A) polymer(polypeptide(L)) [152 aa] Nuclear Pore Complex Protein Nup98 :NUP98_HUMAN
2 b C 1 (C) polymer(polypeptide(L)) [148 aa] Nuclear Pore Complex Protein Nup98 :NUP98_HUMAN 738K 739V 769R 772Y 795R 796R 797K 798E 829T 834R 835C 836L (identity: 100.0 %/100.0 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:1ko6_A_1 identity=100.0%
queryA       729:MHPAGIILTKVGYYTIPSMDDLAKITNEKGECIVSDFTIGRKGYGSIYFEGDVNLTNLNLDDIVHIRRKEVVVYLDDNQKPPVGEGLNRKAEVTLDGVWP: 828
                :****************************************************************************************************:
1ko6_A_1      36:MHPAGIILTKVGYYTIPSMDDLAKITNEKGECIVSDFTIGRKGYGSIYFEGDVNLTNLNLDDIVHIRRKEVVVYLDDNQKPPVGEGLNRKAEVTLDGVWP: 135
SecStr          :  SS  B  STTEEEES HHHHHHHS TTS  EESSEEEEETTTEEEEE S EE TT BHHHHEEEETTEEEESSSTTS   TTSTTSS EEEEE S   :    
ExpBur          :ebebebebeeeebebeeebeebeeebeeeeebebeebbbbbeeebbbebeeebebeebebbebbbbeeeebebbeeeeeeeeeeeebbbebebbbeebbb:    
Contact         :         bb                             b  b                      bbbb                              

queryA       829:TDKTSRCLIKSPDRLADINYEGRLEAVSRKQGAQFKEYRPETGSWVFKVSHF: 880
                :****************************************************:
1ko6_A_1     136:TDKTSRCLIKSPDRLADINYEGRLEAVSRKQGAQFKEYRPETGSWVFKVSHF: 187
SecStr          :  TTT S    HHHHHHHTHHHHHHHHHHHTT EEEEEEGGGTEEEEEES  :    
ExpBur          :ebeeeeeebeeeeebeeeebeeebeeebeeeebebeebeeeebbbbbebeee:    
Contact         :b    bbb                                                                                            


Input Residue Numbers for Focused Sites

ex) 2,15,123