Protein Model on 4ni9_C_1_D_1
(TEMPLATE: 
4ni9
)Protein Model on 4ni9_C_1_D_1
(TEMPLATE: 4ni9
)| CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model]
[for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(IL6_HUMAN) | C 1 (C) | polymer(polypeptide(L)) [148 aa] | Interleukin-6 :IL6_HUMAN | |
| 2 | b | D 1 (D) | polymer(polydeoxyribonucleotide) [32 base] | SOMAmer SL1025 | 47L 52R 55K 56Q 58R 59Y 61L 62D 141R 145M 146S 149V 152Q 153F 156K 203Q 207R 210R (identity: 100.0 %/87.6 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:4ni9_C_1 identity=87.6% |
queryA 44:RQPLTSSERIDKQIRYILDGISALRKETCNKSNMCESSKEALAENNLNLPKMAEKDGCFQSGFNEETCLVKIITGLLEFEVYLEYLQNRFESSEEQARAV: 143
:**************************** ********************************************************:
4ni9_C_1 18:RQPLTSSERIDKQIRYILDGISALRKETXXXXXXXXXXXXXXXXNNLNLPKMAEKDGCFQSGFNEETCLVKIITGLLEFEVYLEYLQNRFESSEEQARAV: 117
SecStr : HHHHHHHHHHHHHHHHHHHHHH ---------------- S GGG SSSS HHHHHHHHHHHHHHHHHHHHTTGGGGTTSHHHHHHH:
ExpBur :eeeeeeebebbebbeebeebbeebbeee----------------eeeebbebeeebbbeeeeeeeeebbeebbbbbbebebbbebbeebbeeeeeebeeb:
Contact : b b bb bb bb b
queryA 144:QMSTKVLIQFLQKKAKNLDAITTPDPTTNASLLTKLQAQNQWLQDMTTHLILRSFKEFLQSSLRALRQM: 212
:*************** *************************************************:
4ni9_C_1 118:QMSTKVLIQFLQKKAXXXXXITTPDPTTNASLLTKLQAQNQWLQDMTTHLILRSFKEFLQSSLRALRQM: 186
SecStr :HHHHHHHHHHHHH ----- TTTHHHHHHHHTTS HHHHHHHHHHHHHHHHHHHHHHHHHHTT :
ExpBur :bebbeebbeebeeee-----eeeeeeeeeeeeeeebeebeeeebeebbebbbeebeebbebbbebbeeb:
Contact : bb b bb b b b b
|
[assembly_id:1]
[help]