Protein Model on 8qy6_C_1_B_1 (TEMPLATE: 8qy6 )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(IL6RB_HUMAN) C 1 (C) polymer(polypeptide(L)) [201 aa] Interleukin-6 receptor subunit alpha :IL6RA_HUMAN
2 b B 1 (B) polymer(polypeptide(L)) [157 aa] Interleukin-6 :IL6_HUMAN 189V(F) 252V(F) 253I(Y) 254I(R) 304E 305D(F) 307K(Q) (identity: 14.3 %/27.1 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:8qy6_C_1 identity=27.1%
queryA       187:STVYFVNIEVWVEAENALGKVTSDHINFDPVYKVKPNPPHNLSVINSEELSSILKLTWTNPSI--KSVIILKYNIQYRTKDASTWSQIPPEDTASTRSSF: 284
                :*  * *   *        *   *    *       * ** *  *         *  **  *     *   *     **     *       *        :
8qy6_C_1     185:SSFYIVSMCV----ASSVGSKFSKTQTFQGCGILQPDPPANITVTAVARNPRWLSVTWQDPHSWNSSFYRLRFELRYRAERSKTFTTWMVKDL---QHHC: 277
SecStr          :  EEEEEEEE----E SS  EE   EEEETTT B     EEEEEEEETTEEEEEEEEEE  TT   SSS EEEEEEEEESS    EEEE  TT--- SEE:    
ExpBur          :ebebebbbbb----eeeeeeeebeeeebebeebbebeebeebebeeeeeeeeebbbebeebeebebeebebebbbebbbeebeeeeeeebeee---eeeb:    
Contact         :  b                                                                bbb                              

queryA       285:TVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITY: 322
                :   *       *   *   * * * ** ** ** *   :
8qy6_C_1     278:VIHDAWSGLRHVVQLRAQEEFGQGEWSEWSPEAMGTPW: 315
SecStr          :EETT  TT  EEEEEEEEETT  S        EEE   :    
ExpBur          :ebeebeeeeebbbbbebbbeeeeeebbeebeebebebe:    
Contact         :                   bb b                                                                             


Input Residue Numbers for Focused Sites

ex) 2,15,123