[pdbjlvh2]Protein Model on 8dpu_P_1_UA

Protein Model on 8dpu_P_1_UA_1 (TEMPLATE: 8dpu )

CurrentView:HTML5 Change to:[JAVA]

DOWNLOAD:

[sequence-replaced 3D model] [for PyMOL]

[3D template]

[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:3]

Window size :
[small] [medium] [large]

[help]

MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(IL6RB_HUMAN)	P 1 (P)	polymer(polypeptide(L)) [298 aa]	Interleukin-6 receptor subunit beta :IL6RB_HUMAN
2	b		UA 1 (P)	non-polymer(NAG)	2-acetamido-2-deoxy-beta-D-glucopyranose	155E 157N (identity: 100.0 %/100.0 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:8dpu_P_1 identity=100.0%

queryA        26:DPCGYISPESPVVQLHSNFTAVCVLKEKCMDYFHVNANYIVWKTNHFTIPKEQYTIINRTASSVTFTDIASLNIQLTCNILTFGQLEQNVYGITIISGLP: 125
                :****************************************************************************************************:
8dpu_P_1       5:DPCGYISPESPVVQLHSNFTAVCVLKEKCMDYFHVNANYIVWKTNHFTIPKEQYTIINRTASSVTFTDIASLNIQLTCNILTFGQLEQNVYGITIISGLP: 104
SecStr          :   EEEESSS EEETT  EEEEEEE HHHHHHHT  GGGEEEEETTEE  GGGEEEEETTEEEEEE S   SEEEEEEEE GGGT  EEEEEEEEEEE  :    
ExpBur          :eebbebeeeebebeeeeebebebebeeebbeeeebebeebebebeeeebeeeebeeeeeebbbbebeebeeeebebebbbebeeeeeeebeebebebbeb:    

queryA       126:PEKPKNLSCIVNEGKKMRCEWDGGRETHLETNFTLKSEWATHKFADCKAKRDTPTSCTVDYSTVYFVNIEVWVEAENALGKVTSDHINFDPVYKVKPNPP: 225
                :****************************************************************************************************:
8dpu_P_1     105:PEKPKNLSCIVNEGKKMRCEWDGGRETHLETNFTLKSEWATHKFADCKAKRDTPTSCTVDYSTVYFVNIEVWVEAENALGKVTSDHINFDPVYKVKPNPP: 204
SecStr          :    EEEEEEEETTS  EEEEE  S  SS  EEEEEEEETTEE   EE  SS TTEEE SS   TTS EEEEEEEEETTEEEE   EEE GGGSEE    :    
ExpBur          :beebeebebbbbbeeebebebeeeeebebeeebbbbbeeeeeeeeebeeeeeeeebbebebebeeeeebebbbebebeeeeeebeeeebbbbeebebeeb:    
Contact         :                             b b                                                                    

queryA       226:HNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIPPEDTASTRSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYE: 323
                :**************************************************************************************************:
8dpu_P_1     205:HNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIPPEDTASTRSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYE: 302
SecStr          :EEEE     SS SEEEEEEE  GGGGTS EEEEEEEEETT SS EE  GGGG S  SEEEEES  TT EEEEEEEEEETTS S        EEEE   :    
ExpBur          :eebebeebeeeeeebebebebbebeeebebbbbbbebeeeeeeeeebeeeebeeeeeebebeebeeeeebbbebebbbeeeeeeebeebeebebebee:

Protein Model on 8dpu_P_1_UA_1 (TEMPLATE: 8dpu )

Input Residue Numbers for Focused Sites