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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(IL6RB_HUMAN) | D 1 (B) | polymer(polypeptide(L)) [398 aa] | Leukemia inhibitory factor receptor :LIFR_HUMAN | |
2 | b | H 1 (H) | branched(oligosaccharide) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | 195E 196V(I) 215D(N) 217V(T) 218Y(E) 305D(T) (identity: 16.7 %/29.5 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:8d74_D_1 identity=29.5% |
queryA 31:ISPESPVVQLHSNFTAVCVLKEKCMDYF--HVNANYIVWKTNHFTIPKEQYTIINRTASSVTFTDIASLNIQLTCNILTFGQLEQNVYGITIISGLPPEK: 128 : * * * * ** ** * * * * * ** * * * * * ** : 8d74_D_1 210:VFPQDKVILVGSDITFCCVSQEKVLSALIGHTNCPLIHLDGENVAIKIRNISVSASSGTNVVFTT------------------EDNIFGTVIFAGYPPDT: 291 SecStr :EE SSEEEETT EEEEE SS EEEEESSS B EE SSS EEEEE S SS EEEEEEE------------------SS EEEEEEEEE : ExpBur :bbeeeeebeeeeebbbbbbbeeebeebebeeeebeeeebeeebbbbebeebeebeeebeebebeb------------------eeeeeebebbbbeebbe: queryA 129:PKNLSCIVNEGKKMRCEWDGGRETHL----ETNFTLKSEWATHKFADCKAKRDTPTSCTVDYSTVYFVNIEVW---VEAENALGKVTSDHINFDPVYKVK: 221 :* * * * * * ** * * * ** * * * * * * ** * * ** : 8d74_D_1 292:PQQLNCETHDLKEIICSWNPGRVTALVGPRATSYTLVESFSGKYVRLKRAXXXXNESYQLLFQML--PNQEIYNFTLNAHNPLGRSQST-ILVNITEKVY: 388 SecStr : EEEEEEBSSTTEEEEEEE S S STTS EEEEEESSS EEE ---- EEEEEE --TT EEEEEEEEE SS EEEEE-EEEEGGG B : ExpBur :beebebebeeeeebbbebeeeeebebeeeeebbbbbebeeeeeeeebeee----eeeeebebebe--eebeebebbbebebeeeebeee-eebebeeebe: Contact : bb b bb queryA 222:PNPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIPPEDTASTRSSFTV--QDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASG: 319 :* * * * ** * * * * * * * ** * * * * * ***** * ** ** : 8d74_D_1 389:PHTPTSFKVKDIN--STAVKLSWHLPGNFAKINFLCEIEIK-KSNSVQEQRNVTIKGVENSSYLVALDKLNPYTLYTFRIRCSTETF-WKWSKWSNKKQH: 484 SecStr : EEEE S--SSS EEE S SSS EEEEEEEE- SSS EEEEEEEE SSB S SS B BSSS- : ExpBur :bebbeebebeeee--eebbebebebeeebeeeebebbbbbe-eeeeeeeeeeeebeeeeeeebebebeeeeeeeebbbebebbbeee-eeebeebeebee: Contact : b queryA 320:ITYE: 323 : * *: 8d74_D_1 485:LTTE: 488 SecStr : : ExpBur :beee: |