[pdbjlvh2]Protein Model on 8d74_D_1_G

Protein Model on 8d74_D_1_G_1 (TEMPLATE: 8d74 )

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[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(IL6RB_HUMAN)	D 1 (B)	polymer(polypeptide(L)) [398 aa]	Leukemia inhibitory factor receptor :LIFR_HUMAN
2	b		G 1 (G)	branched(oligosaccharide)	2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose	163E(S) 210D(T) (identity: 0.0 %/29.5 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:8d74_D_1 identity=29.5%

queryA        31:ISPESPVVQLHSNFTAVCVLKEKCMDYF--HVNANYIVWKTNHFTIPKEQYTIINRTASSVTFTDIASLNIQLTCNILTFGQLEQNVYGITIISGLPPEK: 128
                :  *   *    *  *  **  **       * *   *        *              * **                   * *  *  *  * **  :
8d74_D_1     210:VFPQDKVILVGSDITFCCVSQEKVLSALIGHTNCPLIHLDGENVAIKIRNISVSASSGTNVVFTT------------------EDNIFGTVIFAGYPPDT: 291
SecStr          :EE SSEEEETT  EEEEE  SS EEEEESSS  B  EE SSS EEEEE S     SS EEEEEEE------------------SS EEEEEEEEE     :    
ExpBur          :bbeeeeebeeeeebbbbbbbeeebeebebeeeebeeeebeeebbbbebeebeebeeebeebebeb------------------eeeeeebebbbbeebbe:    

queryA       129:PKNLSCIVNEGKKMRCEWDGGRETHL----ETNFTLKSEWATHKFADCKAKRDTPTSCTVDYSTVYFVNIEVW---VEAENALGKVTSDHINFDPVYKVK: 221
                :*  * *     *   * *  ** * *     *  **             *      *           * *       * * **   *  *      ** :
8d74_D_1     292:PQQLNCETHDLKEIICSWNPGRVTALVGPRATSYTLVESFSGKYVRLKRAXXXXNESYQLLFQML--PNQEIYNFTLNAHNPLGRSQST-ILVNITEKVY: 388
SecStr          : EEEEEEBSSTTEEEEEEE  S  S  STTS EEEEEESSS  EEE    ----   EEEEEE  --TT  EEEEEEEEE SS EEEEE-EEEEGGG B :    
ExpBur          :beebebebeeeeebbbebeeeeebebeeeeebbbbbebeeeeeeeebeee----eeeeebebebe--eebeebebbbebebeeeebeee-eebebeeebe:    
Contact         :                                      b                                  b b            b           

queryA       222:PNPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIPPEDTASTRSSFTV--QDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASG: 319
                :*  *    *      *   ** *  *     *     *    *  *   *          **  *    * * * * *****  *     ** **     :
8d74_D_1     389:PHTPTSFKVKDIN--STAVKLSWHLPGNFAKINFLCEIEIK-KSNSVQEQRNVTIKGVENSSYLVALDKLNPYTLYTFRIRCSTETF-WKWSKWSNKKQH: 484
SecStr          :    EEEE    S--SSS   EEE  S  SSS EEEEEEEE- SSS EEEEEEEE    SSB      S    SS   B    BSSS-            :    
ExpBur          :bebbeebebeeee--eebbebebebeeebeeeebebbbbbe-eeeeeeeeeeeebeeeeeeebebebeeeeeeeebbbebebbbeee-eeebeebeebee:    

queryA       320:ITYE: 323
                : * *:
8d74_D_1     485:LTTE: 488
SecStr          :    :    
ExpBur          :beee:

Protein Model on 8d74_D_1_G_1 (TEMPLATE: 8d74 )

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