[pdbjlvh2]Protein Model on 8avd_F_1_E

Protein Model on 8avd_F_1_E_1 (TEMPLATE: 8avd )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(IL6RB_HUMAN)	F 1 (F)	polymer(polypeptide(L)) [399 aa]	Leptin receptor :LEPR_MOUSE
2	b		E 1 (E)	polymer(polypeptide(L)) [140 aa]	Leptin :LEP_MOUSE	131N(Y) 132L 133S(T) 162S 163E(L) 164W(Y) 188T(P) 189V(I) 190Y(F) 191F(L) 192V(L) 193N(S) 253I(V) 254I(F) 256K(E) (identity: 13.3 %/27.2 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:8avd_F_1 identity=27.2%

queryA        33:PESPVVQLHSNFTAVCVLKEKCMDYFHVNANYIVWKTNHF-TIPKEQYTIINRTASSVTFTDIAS--------LNIQLTCNILTFGQLEQNVYGITIISG: 123
                :*        **    *  *             ***  *    **  ** *     * ***                   **           * *     :
8avd_F_1     314:PPKILTSVGSNASFHCIYKNENQI---ISSKQIVWWRNLAEKIPEIQYSIVSDRVSKVTFSNLKATRPRGKFTYDAVYCCNEQACHHRYAELYVIDVNIN: 410
SecStr          :SSEEEEETT  EEEEEEEBSSS B---  TTTEEEEETTTEE  GGGEEESSSS EEEEE S      BTTB SEEEEEEETTB  S  EEEEEE     :    
ExpBur          :beebbebeeeebebbbbbbeeeee---bebeebbbeebeeeebeeeeeeeeeeebbebebeebeebeeeeeebbbbbbbbbeeeeeeeebbbbbbebebe:    

queryA       124:LPPEKPKNLSCIVNEGKKMRCEWDGGRETHL-----ETNFTLKSEWA--------THKFADCKAKRDTPTSCTVDYSTVYFVN-IEVWVEAENALGKVTS: 209
                :   *    *        ** * *       *            *           *     *   **    *               *      **   *:
8avd_F_1     411:ISCETDGYLT-------KMTCRWSPSTIQSLVGSTVQLRYHRRSLYCPDSPSIHPTSEPKNCVLQRDGFYECV--FQPIFLLSGYTMWIRINHSLGSLDS: 501
SecStr          :EEEEE TTSS------- EEEEE  TTTTT  SSEEEEEEEEESSS  SS    SS EE   EE TTS EEEE--E S  TTSEEEEEEEEEETTEEEE :    
ExpBur          :bebebbeeee-------ebebebebeebeebeebeeebbebeeeeeeeeeeeeeeebeeeebeeeeeeeeebe--beebeeebbbbbbbbbebeeeebeb:    
Contact         :       bbb                                 bbb                               bbbbbb                 

queryA       210:DHINFDPVYKVKPNPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDAST-----WSQIPPEDTASTRSSFTVQDLKPFTEYVFRIRCMKE: 304
                :      *   *** ** *            **  *  *          * *             *      *  *   *  * **     **   **   :
8avd_F_1     502:PPTCVLPDSVVKPLPPSNVKAEITVN-TGLLKVSWEKP-----VFPENNLQFQIRYGLSGKEIQWKTHEVFDAKSKSASLLVSDL--CAVYVVQVRCRRL: 593
SecStr          :  EEE GGGGB     EEEEEEE TT-T EEEEEEE  -----SS  S EEEEEEEEESSSS   EEEEE  TT  EEEEE S T--TS EEEEEEEEET:    
ExpBur          :eeebbbbeebbebeebeebebebbee-ebebebebeeb-----eebeeebebbbebbeeeeeeeeeeeebeeeebeebebebeee--ebebbbbbebebe:    
Contact         :                                           bb b                                                     

queryA       305:DGKGYWSDWSEEA: 317
                :** **** **  *:
8avd_F_1     594:DGLGYWSNWSSPA: 606
SecStr          :T  S        E:    
ExpBur          :eeebeebeebeeb:

Protein Model on 8avd_F_1_E_1 (TEMPLATE: 8avd )

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