[pdbjlvh2]Protein Model on 8avb_B_1_A

Protein Model on 8avb_B_1_A_1 (TEMPLATE: 8avb )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(IL6RB_HUMAN)	B 1 (B)	polymer(polypeptide(L)) [593 aa]	Leptin receptor :LEPR_MOUSE
2	b		A 1 (A)	polymer(polypeptide(L)) [140 aa]	Leptin :LEP_MOUSE	131N(Y) 132L 133S(T) 162S 163E(L) 164W(Y) 188T(P) 189V(I) 190Y(F) 191F(L) 192V(L) 193N(S) 215D(L) 254I(F) 256K(E) 257Y(N) (identity: 12.5 %/25.9 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:8avb_B_1 identity=25.9%

queryA        33:PESPVVQLHSNFTAVCVLKEKCMDYFHVNANYIVWKTNHF-TIPKEQYTIINRTASSVTFTDIAS--------LNIQLTCNILTFGQLEQNVYGITIISG: 123
                :*        **    *  *             ***  *    **  ** *     * ***                   **           * *     :
8avb_B_1     331:PPKILTSVGSNASFHCIYKNENQI---ISSKQIVWWRNLAEKIPEIQYSIVSDRVSKVTFSNLKATRPRGKFTYDAVYCCNEQACHHRYAELYVIDVNIN: 427
SecStr          :SSEEEE TT  EEEEEE EETTEE---  TTTEEEEETTTEE  TTTEEES SSSEEEEESS      BTTB EEEEEEEETTB  S  EEEEE      :    
ExpBur          :eeeeeeeeeeebebbbebbbeeeb---bebeebbbeeeeeeebeeeebeeeeeebbebebeebeebeeeeeebbbbbbbbeeeeeeeeebbbbbbebebe:    

queryA       124:LPPEKPKNLSCIVNEGKKMRCEWDGGRETHL-----ETNFTLKSEWA--------THKFADCKAKRDTPTSCTVDYSTVYFVN-IEVWVEAENALGKVTS: 209
                :   *    *        ** * *       *            *           *     *   **    *               *      **   *:
8avb_B_1     428:ISCETDGYLT-------KMTCRWSPSTIQSLVGSTVQLRYHRRSLYCPDSPSIHPTSEPKNCVLQRDGFYECV--FQPIFLLSGYTMWIRINHSLGSLDS: 518
SecStr          :EEEEE SSSS------- EEEEE  TTTTT  SSEEEEEEEE SSS  SS    S  EEE  EE TTS EEEE--E S  TTS EEEEEEEEETTEEEE :    
ExpBur          :eebbbbeeee-------ebbbebebeebeeeeeeeeebeebeeeeebeeeeeeeeebeebebeeeeeeeeebe--beebeeebbbbbbbbbebeeeeeeb:    
Contact         :       bbb                                 bbb  b                            bbbbbb                 

queryA       210:DHINFDPVYKVKPNPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDAST-----WSQIPPEDTASTRSSFTVQDLKPFTEYVFRIRCMKE: 304
                :      *   *** ** *            **  *  *          * *             *      *  *   *  * **     **   **   :
8avb_B_1     519:PPTCVLPDSVVKPLPPSNVKAEITVN-TGLLKVSWEKP-----VFPENNLQFQIRYGLSGKEIQWKTHEVFDAKSKSASLLVSDL--CAVYVVQVRCRRL: 610
SecStr          :  EEE GGGGB     EEEEEEE TT-T  EEEEEE  -----S   S EEEEEEEEESSSS   EEEEE  TT  EEEE  S S--SS EEEEEEEEET:    
ExpBur          :ebebebbeebbebeebeebebebbee-ebebebebeeb-----ebbeeebebbbbbbeeeeeeeeeeeebeeeeeeebebebeee--beebbbbbbbebe:    
Contact         :     b                                      b bb                                                    

queryA       305:DGKGYWSDWSEEASGITYEDR-PSKAPSFWYKIDPSHTQGYRTVQLVWKTLPPFEANGKILDYEVT-LTRWKSHLQNYTVNATKLTVNLTNDRYLATLTV: 402
                :** **** **  *         *   * ** * *   *   * * * ** *           * *   *           * * **   *      *   :
8avb_B_1     611:DGLGYWSNWSSPAYTLVMDVKVPMRGPEFWRKMDGDVTKKERNVTLLWKPLTKNDSLCSVRRYVVKHRTAHNGTWSEDVGNRTNLTFLWTEPAHTVTVLA: 710
SecStr          :T  S        EE      SS SB   EEEEEES SS SSEEEEEEE    TTTSTT   EEEEEEEETTTEEEEEEEES SEEEEEE SSEEEEEEEE:    
ExpBur          :eeeeeebeebeebebeeebbebbeebbebbbeeeeeeeeeebebbbebeebeeeebbbebeebbbebebeeeeeeeeebbeeeeeebebebeebbbebeb:    

queryA       403:RNLVGKSDAAVLTIPACDFQATHPVMDLKAFP-KDNMLWVEWT-TPRE-SVKKYILEWCVLSDKAPCITDWQQEDGTVHRTYLRGNLAESKCYLITVTPV: 499
                : *  * *                 *  * * *         **  *   *      **  *         *      *   *   *      *     **:
8avb_B_1     711:VNSLGASLVNFNLTFSWPMSKVSAVESLSAYPLSSSCVILSWTLSPDDYSLLYLVIEWKILNEDDG--MKWLRIPSNVKKFYIHDNFIPIEKYQFSLYPV: 808
SecStr          :E SS   SB  EEEEESGGGG   EEEEEEE   SSEEEEEEEE   SS EEEEEEEEEETT SS -- EEEEEETT SEEEEES   TTS EEEEEEEE:    
ExpBur          :ebeeeebeeeeebbbbbeebebebbeebebeeeeeebbbbbbebbeeeeebebbbbbbbbbeeeee--eebeebebeeeeeebeeebeeeeebebbbbbb:    

queryA       500:YADGPGSPESIKAY: 513
                :   * * *  *   :
8avb_B_1     809:FMEGVGKPKIINGF: 822
SecStr          :ESSSB   EEEEE :    
ExpBur          :beebbbeeeebebe:

Protein Model on 8avb_B_1_A_1 (TEMPLATE: 8avb )

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