[pdbjlvh2]Protein Model on 7z0l_A

Protein Model on 7z0l_A_1 (TEMPLATE: 7z0l )

CurrentView:HTML5 Change to:[JAVA]

DOWNLOAD:

[sequence-replaced 3D model] [for PyMOL]

[3D template]

[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]

MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description
1	a	A(IL6RB_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [292 aa]	Interleukin-6 receptor subunit beta :IL6RB_MOUSE

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:7z0l_A_1 identity=71.6%

queryA        28:CGYISPESPVVQLHSNFTAVCVLKEKCMDYFHVNANYIVWKTNHFTIPKEQYTIINRTASSVTFTDIASLNIQLTCNILTFGQLEQNVYGITIISGLPPE: 127
                :**** ** ****  ***** ***** *     *** ********   * ** * **** *******      ******* *** ****** *  ** ** :
7z0l_A_1       1:CGYIYPEFPVVQRGSNFTAICVLKEACLQHYYVNASYIVWKTNHAAVPREQVTVINRTTSSVTFTDVVLPSVQLTCNILSFGQIEQNVYGVTMLSGFPPD: 100
SecStr          : EEEESSS EEETTS EEEEEEE HHHHHHH   GGGEEEEETTEE  GGGEEEEETTEEEEEESS   SEEEEEEEEE GGG EEEEEEEEEEEE    :    
ExpBur          :ebebeeeebebeeeeebebebebeeebbeeeebebeebbbeeeeeebeeeeeeeeeeebbbbebeebeeeebebbbbbebeeeeeeebeebebebbeebe:    

queryA       128:KPKNLSCIVNEGKKMRCEWDGGRETHLETNFTLKSEWATHKFADCKAKRDTPTSCTVDYSTVYFVNIEVWVEAENALGKVTSDHINFDPVYKVKPNPPHN: 227
                :** ** ******* * * ** **** **** ******** ** **  *    *** * *   * **************** *  ****** **** ** *:
7z0l_A_1     101:KPTNLTCIVNEGKNMLCQWDPGRETYLETNYTLKSEWATEKFPDCQSKHG--TSCMVSYMPTYYVNIEVWVEAENALGKVSSESINFDPVDKVKPTPPYN: 198
SecStr          :  EEEEEEEETTS  EEEEE  S  SS EEEEEEEEETTEE   EEESS --SEEE SS   TTS EEEEEEEEETTEEEE   EEE GGGGEE    EE:    
ExpBur          :ebeebebebebeeebebebeeeeebebebebbbebebeeeebeebebeee--eebebebebebeeebebebbbebeeeeeebeeeebbbbebbebeebee:    

queryA       228:LSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIPPEDTASTRSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGIT: 321
                :*** *********** *          **  *********** * * *** * * ******************  *  ************** *:
7z0l_A_1     199:LSVTNSEELSSILKLSWVSSGLGGLLDLKSDIQYRTKDASTWIQVPLEDTMSPRTSFTVQDLKPFTEYVFRIRSIKDSGKGYWSDWSEEASGTT: 292
SecStr          :EEEEE SS TT EEEEEE  HHHHTS EEEEEEEEETT  S EE  GGGG S  SEEEE S  TT EEEEEEEEEETTS S        EEEE :    
ExpBur          :bebeeeeeeeebbebebebbbeeeebebbbbbbbbeeeeeeeeebeeeebeeeeeebebeebeeeeebbbebebbbeeeebebbeebeebebeb:

Protein Model on 7z0l_A_1 (TEMPLATE: 7z0l )

Input Residue Numbers for Focused Sites