Protein Model on 7y8s_B_1_D_1 (TEMPLATE: 7y8s )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(IL6RB_HUMAN) B 1 (B) polymer(polypeptide(L)) [288 aa] Dscam :A0A161FW14_MESMA
2 b D 1 (B) non-polymer(NA) SODIUM ION 298R(T) 314S 315E 316E(T) (identity: 50.0 %/31.3 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:7y8s_B_1 identity=31.3%
queryA       228:LSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIPPEDTASTRSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYEDRPS: 327
                :* *   *  *     *** *      * **  **  **         *      **     * * * *        * * *     **    ** *  **:
7y8s_B_1       7:LDVKIQEIWSRSANITWTAPYSXXSPITKYFVQYW-KDKAGSQMLQEEEVTAAHSSVVINNLHPGTSYALTVIAENEIGHG---EPSETVRFITGEEEPS: 102
SecStr          :EEEEEEEE SS EEEEEE    --  EEEEEEEEE-E SSS    EEEEEETT SEEEE S  TT EEEEEEEEEESS SS---  EEEEEEE       :    
ExpBur          :eebeeeeeeeebbbbebeebee--eebeebbbbbe-eeeeeeeeeeeeebeeeeeebebeebebeeebbbbbbbebeeeee---eeeeebebebeeeebe:    
Contact         :                                                                      b               bbb           

queryA       328:KAPS-FWYKIDPSHTQGYRTVQLVWKTLPPFEANGKILDYEVTLTRWKSHLQNYTVNATK-LTVNLTNDRYLATL---TVRNLVGKSDAAVLTIPAC: 419
                :  *   *         *  *    **  *     **   * *         * *         ** *    *  *   *    * *   *  * ** :
7y8s_B_1     103:GPPTDLWVE-----SRGPFTILVRWKAPPKEYWHGKLKGYYVGY-KMEGSPQPYSFKTVEAMNVNITHEYLLNSLKKSTKYSIVVKAYNAAGTGPAS: 193
SecStr          :S  EEEEEE-----EE SS EEEEEE   GGGTSS   EEEEEE-EETT SS  EEEEEE  TT SEEEEEE S  TT EEEEEEEEE SS B    :    
ExpBur          :bebeebeee-----ebbbeebbbebeebeeeebebebebbebbb-beeeeeeeeeeeebebeeeeeebeeebeebeeebebbbbbebbbeeeebeeb:    


Input Residue Numbers for Focused Sites

ex) 2,15,123