Protein Model on 1f6f_B_1_A_1 (TEMPLATE: 1f6f )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(IL6RB_HUMAN) B 1 (B) polymer(polypeptide(L)) [195 aa] PROLACTIN RECEPTOR :PRLR_RAT
2 b A 1 (A) polymer(polypeptide(L)) [183 aa] PLACENTAL LACTOGEN :CSH_SHEEP 140K(E) 161K(E) 188T(S) 189V(I) 190Y(W) 191F(K) 192V(I) 213N(Y) 215D 217V(T) 218Y 251S(D) 252V 253I(F) 254I(T) 256K(E) 280T(H) 304E(D) 305D(H) (identity: 15.8 %/32.4 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:1f6f_B_1 identity=32.4%
queryA       128:KPKNLSCIVNEGKKMRCEWDGGRETHLETNFTL----KSEWATHKFADCKAKRDTPTSC--TVDYSTVYFVNIEVWVEAENALGKVTSDHINFDPVYKVK: 221
                :**    *         * *  *    * **  *      *  *    * *     * **     *       *   * * *  *   **    *  * * :
1f6f_B_1       6:KPEIHKCRSPDKETFTCWWNPGTDGGLPTNYSLTYSKEGEKTTYECPDYKT--SGPNSCFFSKQYTSIWKIYI-ITVNATNQMGSSSSDPLYVDVTYIVE: 102
SecStr          :  EEEEEEBSSSS EEEEEE    TTS  EEEEEEEETTEEEEEE S SST--T TTEEEE TTT  SS EEE-EEEEEEETTEEEE   EEEEGGG B :    
ExpBur          :ebebeebbbebbebbbbebeeeeeeebebebebbbebeeeeeeeebeeeee--eeeebbbbeeeebebeeebe-bbbebebeeeeeebeebebbbbebbe:    
Contact         :            b                        b                            bbbbb                    b b bb   

queryA       222:PNPPHNLS--VINSEELSSILKLTWTNPSIKSV----IILKYNIQYRTKDASTWSQIPPEDTASTRSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSE: 315
                :* ** **   *         *   *  * *  *        * *      *  *              * * ** *   *    **      **** ** :
1f6f_B_1     103:PEPPRNLTLEVKXXXXKKTYLWVKWSPPTITDVKTGWFTMEYEIRLKPEEAEEWEI----HFTGHQTQFKVFDLYPGQKYLVQTRCKPDH--GYWSRWSQ: 196
SecStr          :    EEEEEEE ----    EEEEEE  TTS TTTTSS EEEEEEEEESS S  EE----EEEET SEEEE    TT EEEEEEEEEESS--S       :    
ExpBur          :beebeebeeeee----eeeebebebeebeebeeeeeebebbbbbebbbeeeeeeee----eebeeeeeeebeebeeeeebbbbbebbbee--eeebeebe:    
Contact         :                               bbbbbbbb b                       b                       bb          

queryA       316:EAS: 318
                :* *:
1f6f_B_1     197:ESS: 199
SecStr          : EE:    
ExpBur          :eee:    


Input Residue Numbers for Focused Sites

ex) 2,15,123