Protein Model on 8scz_A_1_B_1 (TEMPLATE: 8scz )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)		 type description a(query A)
1 a A(RIGI_HUMAN) A 1 (A) polymer(polypeptide(L)) [635 aa] Antiviral innate immune response receptor RIG-I :RIGI_HUMAN
2 b B 1 (B) polymer(polyribonucleotide) p3SLR30 298N 299Q 300I 325S 326G 347T 349Q 353N 379K 380Q 381H 416D 418K 498Q 499I 507Q 508K 510E 511Q 514V 518K 546R 635K 636T 637R 697T 698S 718V 750K 829C 830H 847H 853F 858K 861K 872D 874G 875I 888K 907K 908W 909K (identity: 100.0 %/93.1 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:8scz_A_1 identity=93.1%
queryA       242:KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENN: 341
                :****************************************************************************************************:
8scz_A_1     204:KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENN: 303
SecStr          :   HHHHHHHSHHHHT  B  B SSSHHHHHHHHHHHHHHHHT  TT     EEE SSHHHHHHHHHHHHHHTTSS   EE   TTTTTTS HHHHHHT :    
ExpBur          :eeeebbeebbebbeeebbbbbbbeeeebbbebbbbbbbebbeeeeeeeebbbbbbbeeeebbeebeeebeeebeeeebebebbbeeeeeeeebeebbeeb:    
Contact         :                                                        bbb                        bb               

queryA       342:DIIILTPQILVNNLKKGTIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTDEALDYICKLCASLDASVIAT: 441
                :****************************************************************************************************:
8scz_A_1     304:DIIILTPQILVNNLKKGTIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTDEALDYICKLCASLDASVIAT: 403
SecStr          :SEE   HHHHHHHHHHTSS  GGG SEEEETTGGGTTSS HHHHHHHHHHHHHTTT   S  EEEE BS     S  SHHHHHHHHHHHHHHTT SB   :    
ExpBur          :bbbbbbbebbbebeeeeebebbeebbbbbbbebeebeeebebbebbbebbebeeeeeeeeebbbbbbbeebbbeebeeeeebbeebbebbbbbbbbbbbe:    
Contact         :     b b   b                         bbb                                  b b                       

queryA       442:VKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY: 541
                :****************************************************************************************************:
8scz_A_1     404:VKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY: 503
SecStr          : SS  TTGGGT     EEEEE    S  HHHHHHHHHHHHHHHHHTTT S HHHH       TTSHHHHHHHHHHHHHHTT   TTSSHHHHHHHHHHHH:    
ExpBur          :beebeeebeeebeeeeeeeeeeeebeeeebeebbbebbeebbebbeeebeebeeebeeeebebbeeebbebbeebbeebbeeeeeeeeebbebbbbbbbb:    
Contact         :                                                        bb       bb bb  b   b                       

queryA       542:TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVD: 641
                :****************************************************************************************************:
8scz_A_1     504:TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVD: 603
SecStr          :HHHHHHHHHHHHHHHHS HHHHHHHHHHHHHHHHTT  SHHHHHHHHHHHHHHHHHHHHHT TTS  HHHHHHHHHHHHHHHH TT  EEEE S HHHHH:    
ExpBur          :bbbbeebbbbbbbbebbbbebbbeebeebbeebeeebeeebbeebbebbeebbeebeebbeeeebebebbebbbebbeebbeeeeebebbbbbeeeebbe:    
Contact         :    b                                                                                        bbb    

queryA       642:ALKNWIEGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLL: 741
                :********************                            **********       ************            ***********:
8scz_A_1     604:ALKNWIEGNPKLSFLKPGILXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHNILIATSVXXXXXXXAQCNLVILYEYVXXXXXXXXXXXXGRARGSKCFLL: 703
SecStr          :HHHHHHTT SS  S    B ----------------------------  SEEEES  -------    EEEEES  ------------  SSS EEEEE:    
ExpBur          :bbbebbeebeebeebeebee----------------------------eebbebbeee-------eeeebebbbbee------------eeeeebebbbb:    
Contact         :                                                       bb                   b                       

queryA       742:TSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKEC: 841
                :****************************************************************************************************:
8scz_A_1     704:TSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKEC: 803
SecStr          :ESSHHHHHHHHHHHHHHHHHHHHHHHHHHS HHHHHHHHHHHHHHHHHHHHHT         S  EEE SSS  EEEEGGGEEESSSS EEE  STTTTS:    
ExpBur          :beeebbbeebeeeeebeebbeebbeebeeeeeeebeeebeebbeebbeebeeeeeeeeeeeeeebbbbbbbbbbebbebeebbbbeeeebbbbeeebeeb:    
Contact         :        b                                                                              bb           

queryA       842:FVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAEM: 923
                :**********************************************************************************:
8scz_A_1     804:FVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAEM: 885
SecStr          :EEEEE SS    TT EEEEEEEE SSS   B EEEEESSS    EE GGG EEE SSS  EEE SSTTT  S  EE  TTT :    
ExpBur          :beeeebeeeeeeeebeeebebbbeeebbebebbbbbeeeeeebbbbebebbbbbbeeeeebeeeeebeebebeeeebeeeee:    
Contact         :     b     b    b  b          b bb            b                  bbb

Input Residue Numbers for Focused Sites

ex) 2,15,123