[pdbjlvh2]Protein Model on 8hf0_D_1_A

Protein Model on 8hf0_D_1_A_1 (TEMPLATE: 8hf0 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(RIGI_HUMAN)	D 1 (D)	polymer(polypeptide(L)) [1561 aa]	Dicer-2, isoform A :A1ZAW0_DROME
2	b		A 1 (A)	polymer(polypeptide(L)) [1561 aa]	Dicer-2, isoform A :A1ZAW0_DROME	450E 473Y(N) 474I 475I(G) 476A(V) (identity: 40.0 %/29.7 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:8hf0_D_1 identity=29.7%

queryA       242:KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKF--PQGQKGK-VVFFANQIPVYEQQKSVFSKYFE-RHGYRV--TGISGATAENVPVE: 335
                :*** *** *        * *   *** *****  *        *  *    **   *  *      **            *  *   *    *      *:
8hf0_D_1       7:KPRGYQLRL-VDHLTKSNGIVYLPTGSGKTFVAILVLKRFSQDFDKPIESGGKRALFMCNTVELARQQAMAVRRCTNFKVGFYVGEQGVDDWTRGMWSDE: 105
SecStr          :   THHHHH-HHHHTTS EEEE  SSSHHHHHHHHHHHHT GGGSS GGGT  EEEEEESSHHHHHHHHHHHHHHSSS  EEE TTT  TTS HHHHHHH:    
ExpBur          :eeeebbeeb-beebeebbbbbbbebbebbbbbbbbbbeeeeeebeeebeeebebbbbbbebebbbebbbebbeeebebebbebbeeebbeeeeeeebeeb:    

queryA       336:QIVENNDIIILTPQILVNNLKKGTIPSLSIFTLMIFDECHNTSKQHPYN--MIMFNYLDQKLGGSSGPLPQVIGLTAS----------------------: 411
                :     *     * *         *   **     * ****     **    *  *    *        ** * ***                        :
8hf0_D_1     106:--IKKNQVLVGTAQVFLDMVTQ-TYVALSSLSVVIIDECHHGTGHHPFREFMRLFTIANQT------KLPRVVGLTGVLIKGNEITNVATKLKELEITYR: 196
SecStr          :--HHH SEEEEEHHHHHHHHHT-TSS GGGEEEEEESSGGG  TT HHHHHHHHHHHS GG------G  EEEEEES    SS  SSHHHHHHHHHHHSS:    
ExpBur          :--beebbbbbbbbebbbebbbb-ebbebebbbbbbbbbbbbbeeeeebbbbbbbbeeeeee------ebbebbbbbbbbbeeeebeebeeebeebbbbbb:    

queryA       412:---VGVGDAKNTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVES-RISDKFKYIIAQLMRDTESL-------AKRICKDLENLSQIQ: 500
                :     * * *       *     *     *     *     ***           *    *     *  *  *   **        *   * * *    *:
8hf0_D_1     197:GNIITVSDTKEMENVMLY-----ATKPTEVMVSFPHQ----EQVLTVTRLISAEIEKFYVSLDLMNIGVQPIRRSKSLQCLRDPSKKSFVKQLFNDFLYQ: 287
SecStr          :SEEE    HHHHHHHTTT-----    EEEEEEE   ----    HHHHHHHHHHHHHHHHHTT   S    EE TTSSSEE  HHHHHHHHHHHHHHHH:    
ExpBur          :bbbbbbeeeebeeebeeb-----beebebeebbbeee----eeeeebbeebeeebeebbeebeebebeeeeeeebeebeeeeeeeebeebbebbebbebb:    
Contact         :                                         b                       bbbb                               

queryA       501:NREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLYTSHLRKYNDALIISEHARMKDALDYLKD--FFSNVRAAGFDEIEQDLT----QRFEEKL: 594
                :  * *       *         *       *    *              **   *  *       * *             *          ***    :
8hf0_D_1     288:MKEYGIYAASIAIISL---IVEFDIKRRQAETLSVKLM---------HRTALTLCEKIRHL-LVQKLQDMTYDDDDDNVNTEEVIMNFSTPKVQRF----: 370
SecStr          :HHHHBHHHHHHHHHHH---HHHHHHHHHH  SHHHHHH---------HHHHHHHHHHHHHH-HHHHHHTTGGG   HHHHHHHHHHHSB HHHHHH----:    
ExpBur          :beebbbbbbbbbbebb---ebebbeeeeebebeebeeb---------beebbebbeebeee-beeebeebbeeeeeeeebbeebbbebbebbbeeb----:    

queryA       595:QELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTR----ALVDALKNWIEGNPKL-SFLKPGILTGRGKTNQNTGMTLPA--QKCILDAFKA: 687
                :  * *         **  * *                 **  *         * * *   * *   * *    **          *    **     *  :
8hf0_D_1     371:--LMSLKVSFADKDPK--DIC--------------CLVFVERRYTCKCIYGLLLNYIQSTPELRNVLTPQFMVGRNNISPDFESVLERKWQKSAIQQFR-: 451
SecStr          :--HHHHHHHTSS  GG--G  --------------EEEE SSHHHHHHHHHHHHHHHHH SSHHHH  EEE  SSS   S SS  S       HHHHHH-:    
ExpBur          :--bebbeeebeeeeee--ebb--------------bbbbbeeebbbbbbbbbbeebbebbeebeebbebbbbbeeeebeebbebeeeeeeeeebbebbe-:    

queryA       688:SGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLLTSN: 744
                : *  *  *  **  ****   ** *     *       *  ** *    *  * *  :
8hf0_D_1     452:DGNANLMICSSVLEEGIDVQACNHVFILDPVKTFNMYVQSKGRARTTEAKFVLFTAD: 508
SecStr          :TTS  EEEESSSTTSS   S  SEEEE S   SHHHHHHHHHT  STT EEEEEEET:    
ExpBur          :eeebbbbbbbebbbbbbebeebebbbbbbebeebbbbbbbebbbebeebebbbbbbe:

Protein Model on 8hf0_D_1_A_1 (TEMPLATE: 8hf0 )

Input Residue Numbers for Focused Sites