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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(RIGI_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [1561 aa] | Dicer-2, isoform A :A1ZAW0_DROME | |
2 | b | C 1 (C) | polymer(polypeptide(L)) [126 aa] | LD06392p :Q9VLW8_DROME | 462K(E) 468S 471F(L) 472K(M) 473Y(N) 520C(I) 524Q(D) 527D(R) 536K 537A(L) 549N(R) 550D(T) 553I(T) 556E 557H(K) 559R 560M(H) 565D(Q) 671T(F) 672G(E) 673M(S) (identity: 19.0 %/29.7 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:8hf0_A_1 identity=29.7% |
queryA 242:KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKF--PQGQKGK-VVFFANQIPVYEQQKSVFSKYFE-RHGYRV--TGISGATAENVPVE: 335 :*** *** * * * *** ***** * * * ** * * ** * * * * *: 8hf0_A_1 7:KPRGYQLRL-VDHLTKSNGIVYLPTGSGKTFVAILVLKRFSQDFDKPIESGGKRALFMCNTVELARQQAMAVRRCTNFKVGFYVGEQGVDDWTRGMWSDE: 105 SecStr : HHHHHH-HHHHHHS EEEE SSHHHHHHHHHHHHHT GGGSS TTTT EEEEEESSHHHHHHHHHHHHHH S EEEE GGGT TT HHHHHHH: ExpBur :eeeebbeeb-beebeebbbbbbbeeeebbbbbbbbbbeeeeeebeeeeeeebebbbbbbeeeebbebbbebbeeebebebbbbbeeeebeeeeeeebeeb: queryA 336:QIVENNDIIILTPQILVNNLKKGTIPSLSIFTLMIFDECHNTSKQHPYN--MIMFNYLDQKLGGSSGPLPQVIGLTAS----------------------: 411 : * * * * ** * **** ** * * * ** * *** : 8hf0_A_1 106:--IKKNQVLVGTAQVFLDMVTQ-TYVALSSLSVVIIDECHHGTGHHPFREFMRLFTIANQT------KLPRVVGLTGVLIKGNEITNVATKLKELEITYR: 196 SecStr :--HHH SEEEEEHHHHHHHHHT-TSS GGGEEEEEESSGGG TT HHHHHHHGGGTS GG------G EEEEEES S SS TTHHHHHHHHHHHSS: ExpBur :--beebbbbbbbbebbbebbbb-ebbebebbbbbbbbbbbbbeeebbbbbbbbbbeeeeee------ebbebbbbbebbbeeeebeebeeebeebbbbbb: queryA 412:---VGVGDAKNTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVES-RISDKFKYIIAQLMRDTESL-------AKRICKDLENLSQIQ: 500 : * * * * * * * *** * * * * * ** * * * * *: 8hf0_A_1 197:GNIITVSDTKEMENVMLY-----ATKPTEVMVSFPHQ----EQVLTVTRLISAEIEKFYVSLDLMNIGVQPIRRSKSLQCLRDPSKKSFVKQLFNDFLYQ: 287 SecStr :SEEE SHHHHHHHHTT----- EEEEE ---- HHHHHHHHHHHHHHHHHHT S EE TTSSSEE HHHHHHHHHHHHHHHH: ExpBur :bbbbebeeeebeeebeee-----beebeeeeeebeee----eeeeebbeebeebbeebbeebeeeebeebeeeeeeebeeeeeeeebeebbebbebbeeb: Contact : b b bbb queryA 501:NREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLYTSHLRKYNDALIISEHARMKDALDYLKD--FFSNVRAAGFDEIEQDLT----QRFEEKL: 594 : * * * * * * ** * * * * * *** : 8hf0_A_1 288:MKEYGIYAASIAIISL---IVEFDIKRRQAETLSVKLM---------HRTALTLCEKIRHL-LVQKLQDMTYDDDDDNVNTEEVIMNFSTPKVQRF----: 370 SecStr :HHHH HHHHHHHHHHH---HHHHHHHHHH SHHHHHH---------HHHHHHHHHHHHHH-HHHHHHHHTTS HHHHHHHHHHHSS HHHHHH----: ExpBur :beebbbbbbbbbbebb---bbbbeeeeeebebeebeeb---------beebbebbeebeee-beeebeeebeeeeeeeebbeebbbebbebbbeeb----: Contact : b b b bb bb b bb bb b queryA 595:QELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTR----ALVDALKNWIEGNPKL-SFLKPGILTGRGKTNQNTGMTLPA--QKCILDAFKA: 687 : * * ** * * ** * * * * * * * * ** * ** * : 8hf0_A_1 371:--LMSLKVSFADKDPK--DIC--------------CLVFVERRYTCKCIYGLLLNYIQSTPELRNVLTPQFMVGRNNISPDFESVLERKWQKSAIQQFR-: 451 SecStr :--HHHHHHHHSS TT--T --------------EEEE SSHHHHHHHHHHHHHHHTT SSSTTT B SS S SS S HHHHHH-: ExpBur :--bebbeeebeeeeee--ebb--------------bbbbbeeebbbbbbbbbbeebbebbeebeebbebbbebeeeebbebeeeeeeeeeeeebbebbe-: Contact : bbb queryA 688:SGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLLTSN: 744 : * * * ** **** ** * * * ** * * * * : 8hf0_A_1 452:DGNANLMICSSVLEEGIDVQACNHVFILDPVKTFNMYVQSKGRARTTEAKFVLFTAD: 508 SecStr :TTS SEEEESSSSSSSS SEEEE S SHHHHHHHHHH STT EEEEEEEG: ExpBur :eeebbbbbbbeebbbbbebeebebbbbbbebeebbbbebbeebbbeeebebbbbbbe: |