[pdbjlvh2]Protein Model on 8g7v_C_1_B

Protein Model on 8g7v_C_1_B_1 (TEMPLATE: 8g7v )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(RIGI_HUMAN)	C 1 (C)	polymer(polypeptide(L)) [618 aa]	Antiviral innate immune response receptor RIG-I :DDX58_HUMAN
2	b		B 1 (B)	polymer(polypeptide(L)) [178 aa]	E3 ubiquitin-protein ligase RNF135 :RN135_HUMAN	315E (identity: 100.0 %/90.6 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:8g7v_C_1 identity=90.6%

queryA       240:PFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVE: 339
                :****************************************************************************************************:
8g7v_C_1     240:PFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVE: 339
SecStr          :     SHHHHTHHHHTTT  EEEE  SSS HHHHHHHHHHHHHHTS TT    EEEE  SHHHHHHHHHHHHHHHGGGT  B    SSS S S HHHHTT:    
ExpBur          :eeeeeebbebbbebbeeeebbbbbbeeeebbbbbbbbbbeebbeeeeeeeebbbbbbbeeeeebeebeeebeeebeeeeeebbebbeeeeeeeebeebbe:    
Contact         :                                                                           b                        

queryA       340:NNDIIILTPQILVNNLKKGTIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTDEALDYICKLCASLDASVI: 439
                :****************************************************************************************************:
8g7v_C_1     340:NNDIIILTPQILVNNLKKGTIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTDEALDYICKLCASLDASVI: 439
SecStr          :S SEE   HHHHHHHHHTTSS  GGG SEEEESSGGG  SS HHHHHHHHHHHHHSSS  S   EEEEEES     S  SHHHHHHHHHHHHHHTT  B :    
ExpBur          :ebbbbbbbbebbbebbeeeebeebeebebbbbbebeebeeeeebbebbbebbebeeeeeeeeebbbbbbbeebebeebeeeeebbeebbebbbebbbbeb:    

queryA       440:ATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALF: 539
                :****************************************************************************************************:
8g7v_C_1     440:ATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALF: 539
SecStr          :    TTHHHHHTT    EEEEEE    S  HHHHHHHHHHHHHHHHHHHHHS HHHH S  S  SSSHHHHHHHHHHHHHHS    S TTHHHHHHHHHH:    
ExpBur          :bbbeebeeebeeeeeeeeeeeeebeeeeeeebeebbbebbeebbebbeeeeeebeeebeeeeeebeeeebbebbeebbebbbeeeeeeeeebbeebbbbb:    

queryA       540:LYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRAL: 639
                :****************************************************************************************************:
8g7v_C_1     540:LYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRAL: 639
SecStr          :HHHHHHHHHHHHHHHHHHS HHHHHHHHHHHHHHHHTT   HHHHHHHHHHHHHHHHHHHHHS TTS  HHHHHHHHHHHHHHHH TT  B  B S HHH:    
ExpBur          :bbbbbbeebbebbebbeebbbebbbeebeebbeeeeeeeebebbeebbeebeeebeebbeebeeeeeebebbebbbebbeebbeeeeebebebbbeeeeb:    

queryA       640:VDALKNWIEGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCF: 739
                :**********************                            **********         **********               ******:
8g7v_C_1     640:VDALKNWIEGNPKLSFLKPGILXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHNILIATSVXXXXXXXXXCNLVILYEYVXXXXXXXXXXXXXXXRGSKCF: 739
SecStr          :HHHHHHHHHS SS TT    B ----------------------------  SB B S  ---------  B  EES  ---------------   EEE:    
ExpBur          :bebbeebbeebeebeebebbee----------------------------eeebebbeee---------eebebebbee---------------eebebb:    

queryA       740:LLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFK: 839
                :****************************************************************************************************:
8g7v_C_1     740:LLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFK: 839
SecStr          :EEESSTTHHHHHHHHHHHHHHHHHHHHHHTTS SHHHHHHHHHHHHHHHHHHTTS           EEEEESSS  EEEETTTEEBSSSS  EE  TTGG:    
ExpBur          :bbbeeeebbeebeeeeeeeebbeebbeebeeeeeeebeeebeeebeeeeeebeeeeeeeeeeeeeebebbbbbbbbebbebeebbbbeeeebbbebeebe:    

queryA       840:ECFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPA: 921
                :******            ****************************************************************:
8g7v_C_1     840:ECFVSRXXXXXXXXXXXXKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPA: 921
SecStr          :GS EE ------------    EE  STT     EEE   SS   EEE GGGEEEEESSS      SSTTTS     B    :    
ExpBur          :ebbeee------------eeeebbbeeeebebebbebeebeeeebbbbebebbbbbbeeeeebebeeebeebebeeeebeee:

Protein Model on 8g7v_C_1_B_1 (TEMPLATE: 8g7v )

Input Residue Numbers for Focused Sites