Protein Model on 8g7v_A_1_E_1 (TEMPLATE: 8g7v )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)		 type description a(query A)
1 a A(RIGI_HUMAN) A 1 (A) polymer(polypeptide(L)) [647 aa] Antiviral innate immune response receptor RIG-I :DDX58_HUMAN
2 b E 1 (X) polymer(polyribonucleotide) p3dsRNA24a 379K 380Q 381H 499I 507Q 508K 511Q 635K 750K 829C 830H 853F 858K 861K 874G 875I 886V 888K 907K 908W 909K (identity: 100.0 %/94.7 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:8g7v_A_1 identity=94.7%
queryA       241:FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVEN: 340
                :****************************************************************************************************:
8g7v_A_1     241:FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVEN: 340
SecStr          :    SHHHHHSHHHHTT  B  B   HHHHHHHHHHHHHHHHTT  TT     EE  SSHHHHHHHHHHHHTTTTTTT       TTTSSSS SHHHHTT:    
ExpBur          :eeeeebbebbbeebeeebbbbbbbebbebbbbbbbbbbeebbeeeeeeeebbbbbbbeeeeebeebeeebeeebeeeeeebebbbeeeeeeeebeebbee:    

queryA       341:NDIIILTPQILVNNLKKGTIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTDEALDYICKLCASLDASVIA: 440
                :****************************************************************************************************:
8g7v_A_1     341:NDIIILTPQILVNNLKKGTIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTDEALDYICKLCASLDASVIA: 440
SecStr          : SS    HHHHHHHHHHSSS  GGG SBEEEESGGG SSSSTTHHHHHHHHHHHTTT      B  EEBS     S  SHHHHHHHHHHHHHHHT  B  :    
ExpBur          :bbbbbbbbebbbebbeeeebeebeebebbbbbebbebeeeeebbebbbebbebeeeeeeeeebbbbbbbebbbbeebeeeeebbeebbebbbbbbbbebb:    
Contact         :                                      bbb                                                           

queryA       441:TVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFL: 540
                :****************************************************************************************************:
8g7v_A_1     441:TVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFL: 540
SecStr          :   S HHHHHSS    EEEEEE    S  HHHHHHHHHHHHHHHHHHTT TTGGGS       TTSHHHHHHHHHHHHHTT    TTSSSHHHHHHHHHH:    
ExpBur          :ebeebeeebeeeebebeeeeeebeebeeeebeebbbebbeebbebbeeebeebeeebeeeeeebeeeebbebbeebbeebbeeeeeeeeebeebbbbbbb:    
Contact         :                                                          b       bb  b                             

queryA       541:YTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALV: 640
                :****************************************************************************************************:
8g7v_A_1     541:YTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALV: 640
SecStr          :HHHHHHHHHHHHHHHHHS HHHHHHHHHHHHHHHHHH   HHHHHHHHHHHHHHHHHHHHHT TT   HHHHHHHHHHHHHHHH TT  EEEEESSSTTT:    
ExpBur          :bbbbbeebbebbebbeebbbebbbeebeebbeebeeeeeeebbeebbeebeebbeebbebbeeeeeebebbebbbebbeebbeeeeebebbbbbeeeebb:    
Contact         :                                                                                              b     

queryA       641:DALKNWIEGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFL: 740
                :**********************                           **********      *************   *******************:
8g7v_A_1     641:DALKNWIEGNPKLSFLKPGILTXXXXXXXXXXXXXXXXXXXXXXXXXXXDHNILIATSVXXXXXXIAQCNLVILYEYVXXXIKMIQTRGRGRARGSKCFL: 740
SecStr          :THHHHHHTT SS TT       ---------------------------  SEEEES  ------    S EEEES  ---       SSS     EEEE:    
ExpBur          :ebbeebbeebeebeebeebeee---------------------------eeebebbbee------ebebebbbbbbbe---eebebbeeeeebeebebbb:    

queryA       741:LTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKE: 840
                :****************************************************************************************************:
8g7v_A_1     741:LTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKE: 840
SecStr          :EESSHHHHHHHHHHHHHHHHHHHHHHHHTTS HHHHHHHHHHHHHHHHHHHHHT         S  EEEESSS  EEEETTSEEESSSS EEE  SGGGG:    
ExpBur          :bbeeeebbeebeeeeeeeebbeebbeebeeeeeeebeeebeeebeeebeebeeeeeeeeeeeeeebbbbbbbbbbebbebeebbbbeeeebbbeeeebee:    
Contact         :         b                                                                              bb          

queryA       841:CFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAEM: 923
                :***********************************************************************************:
8g7v_A_1     841:CFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAEM: 923
SecStr          :SEE  B SS    TT  EEE  EE SSS   B EEEEE SSSEEEEE GGGEEEE SSS  EE   STTTS S  EE  TTT :    
ExpBur          :bbeeeebeeeeeeeebebebebbbeeeebebebbbbbebeeeebbbbebebbbbbeeeeeebeeeeebeebebeeeebeeeee:    
Contact         :            b    b  b            bb          b b                  bbb

Input Residue Numbers for Focused Sites

ex) 2,15,123