Protein Model on 8dvs_A_1_B_1 (TEMPLATE: 8dvs )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)		 type description a(query A)
1 a A(RIGI_HUMAN) A 1 (A) polymer(polypeptide(L)) [682 aa] Antiviral innate immune response receptor RIG-I :DDX58_HUMAN
2 b B 1 (B) polymer(polyribonucleotide) OHSLR30 298N 299Q 300I 301P 325S 326G 349Q 350I 353N 379K 380Q 381H 418K 498Q 507Q 508K 510E 511Q 514V 518K 546R 635K 637R 662T 663G 664R 665G 667T 668N 697T 698S 699V 718V 719G 720N 750K 829C 830H 851K 853F 858K 886V 888K 906S 907K 908W 909K 910D (identity: 100.0 %/100.0 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:8dvs_A_1 identity=100.0%
queryA       241:FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVEN: 340
                :****************************************************************************************************:
8dvs_A_1     241:FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVEN: 340
SecStr          :    HHHHHHHTTTTTTS B  B  TTS HHHHHHHHHHHHTTSS TT     EEE SSHHHHHHHHHHHHHHHTTTT  EE   TTT SSS HHHHHHT:    
ExpBur          :eeeeebbebbbeebeeeebbbbbbeeebebebbbbbbbeebbeeeeeeeebbbbbbbeeeebbeebeeebeeebeeeebebebbbeeeeeeeebeeebee:    
Contact         :                                                         bbbb                       bb              

queryA       341:NDIIILTPQILVNNLKKGTIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTDEALDYICKLCASLDASVIA: 440
                :****************************************************************************************************:
8dvs_A_1     341:NDIIILTPQILVNNLKKGTIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTDEALDYICKLCASLDASVIA: 440
SecStr          : SEE   HHHHHHHHHTTS S GGG SEEEEBTGGG  SS HHHHHHHHHHHHHTTS   S  EE  BBS    SS  SHHHHHHHHHHHHHHHT  B  :    
ExpBur          :bbbbbbbbebbbebbeeebbeebeebebbbbbbbbbbeeeebbbebbbebbebeeeeeeeebbbbbbbbbbbbbeebeeeeebbeebbebbbbbbbbbbb:    
Contact         :        bb  b                         bbb                                    b                      

queryA       441:TVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFL: 540
                :****************************************************************************************************:
8dvs_A_1     441:TVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFL: 540
SecStr          :   TTHHHHTTTS   B  EEE    S  HHHHHHHHHHHHHHHHHHHH TT TTSS   S  TTSHHHHHHHHHHHHHHHT   TTSSHHHHHHHHHHH:    
ExpBur          :ebeeeeeebeeebeebebeeeebeebeeeebeebbbebbeebbebbeeebeebeeebebeebebbeeebeebbeebbeebbeeeeeeeeebeebbbbbbb:    
Contact         :                                                         b        bb bb  b   b                      

queryA       541:YTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALV: 640
                :****************************************************************************************************:
8dvs_A_1     541:YTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALV: 640
SecStr          :HHHHHHHHHHHHHHHHHS HHHHHHHHHHHHHHHHHS   HHHHHHHHHHHHHHHHHHHHHH GGG  HHHHHHHHHHHHHHHH SS  B  EES HHHH:    
ExpBur          :bbebbeebbbbbebbebbbbebbbeebeebbeebeeeeeeebbeebbebbeeebeebeebbeeeebebebbeebbebbeebbeeeeebbbbbbbeeeebb:    
Contact         :     b                                                                                        b b   

queryA       641:DALKNWIEGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFL: 740
                :****************************************************************************************************:
8dvs_A_1     641:DALKNWIEGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFL: 740
SecStr          :HHHHHHHHT TT  S  B  B     TTSS S  HHHHHHHHHT SSSSS SB  B GGGSSS      SEEEEES    HHHHHHHHTT  SSS EEEE:    
ExpBur          :ebbeebbeebeebeebebbbbbbeeeeeeeeebeeeebeebbebbeeeeebbbbbbbebbbeebebeebbbbbbbbbeeebbebbbbbbbbebeebebbb:    
Contact         :                     bbbb bb                            bbb                  bbb                    

queryA       741:LTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKE: 840
                :****************************************************************************************************:
8dvs_A_1     741:LTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKE: 840
SecStr          :EES HHHHHHHHHHHHHHHHHHHHHHHHTTS HHHHHHHHHHHHHHHHHHHHH        B S EEEEETTT  EEEESTTEEESSSS EEE SHHHHT:    
ExpBur          :bbbeeebbeebeebeebbebbeebbeebeeeeeeebeeebeebbeeebeebeeeeeeeeeeeeeebbbbbbbbbbebbebeebbbbeeeebbbeeeebee:    
Contact         :         b                                                                              bb          

queryA       841:CFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE: 922
                :**********************************************************************************:
8dvs_A_1     841:CFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE: 922
SecStr          :TEEEEE SS   SSS    EEEEE SSS   B EEEEESSSSEEEEE GGGEEEEESSS  EEE SSGGG  B  EE  S  :    
ExpBur          :ebeeeebeeeeeeeebebebbbbbeeeebebebbbbbebeeeebbbbebebbbbbbeeebebeeeeebeebebeeeebeeee:    
Contact         :          b b    b                           b b                 bbbbb

Input Residue Numbers for Focused Sites

ex) 2,15,123