[pdbjlvh2]Protein Model on 8dgi_A_1_B

Protein Model on 8dgi_A_1_B_1 (TEMPLATE: 8dgi )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(RIGI_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [1582 aa]	Endoribonuclease Dcr-1 :DCR1_DROME
2	b		B 1 (N)	polymer(polypeptide(L)) [108 aa]	Loquacious, isoform B :Q9VJY9_DROME	482T(H) 485L(F) (identity: 0.0 %/23.7 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:8dgi_A_1 identity=23.7%

queryA       241:FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKV-VFFANQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVE: 339
                :* **  * **   *    *****      * *  *               * * *             *           **           *      :
8dgi_A_1      15:FTPRDFQVELLATAYE-RNTIICLGHRSSKEFIALKLLQELSRR--ARRHGRVSVYLSCEVGTSTEPCSIYTMLTHLTDLRV--WQEQPDMQIPFDHCWT: 109
SecStr          :     TTTHHHHHHHH-S EEEE S HHHHHHHHHHHHHHHHHH--HHHTT BEEEE SSTTS SS  HHHHHHHHTS S E--EE  TT     SSTTT:    
ExpBur          :eebebebbbbbbbbbe-eebbbbbeebebbbbbbbbbbbbbbbe--bbeeeebbbbbbeebeeeeeebbbbbbbbbbbbbbb--ebbeeeeeeeeeebbe:    

queryA       340:NNDIIILTPQILVNNLKKGTIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTDEALDYICKLCASLDASVI: 439
                :     ** *      *       **   *     **       *  *                *   **      *        *       * *  ** :
8dgi_A_1     110:DYHVSILRPEGFLYLLETREL-LLSRVELIVLEDCHDSAV---YQRIRPLFENHIMPAPPADRPRILGL-----AGPLHSAGCELQQLSAMLATLEQSVL: 200
SecStr          :S SEEEE HHHHHHHHHTTSS- GGGB EEEETTTTSHHH---HHHHHHHHHHHTTTS GGG  EEEEE-----E  GGG  S HHHHHHHHHHHHHHH :    
ExpBur          :eebbbbbbbeebeebbeeeeb-ebeebbbbbbbebbeeeb---beebeebbeebbeebeeeeebbbbbb-----bbbbbbbebebbbbebbbebbeebbe:    

queryA       440:ATVKHNLEELEQVVY--KPQKFFRKVESRISDKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKA: 537
                :              *   *            *      *       *                                                     :
8dgi_A_1     201:CQIESASDIVTVLRYCSRPHEYIVQCAPFEMDELSLVLADVLNTHKSF----------------------------------------------------: 248
SecStr          : EEE  SHHHHHHHSS   EEEEEE       HHHHHHHHHHHHHHHH----------------------------------------------------:    
ExpBur          :bbbbbbbebbbbbbbbeebebebbbbeebeeeebbeebeeebeebbee----------------------------------------------------:    
Contact         :                                            b  b                                                    

queryA       538:LFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVK--: 635
                :                                                                                                    :
8dgi_A_1     249:--------------------------------------------------------------------------------------------------LL: 250
SecStr          :--------------------------------------------------------------------------------------------------HH:    
ExpBur          :--------------------------------------------------------------------------------------------------be:    
Contact         :                                                                                                   b

queryA        -1:----------------------------------------------------------------------------------------------------:  -1
                :                                                                                                    :
8dgi_A_1     251:DHRYDPYEIYGTDQFMDELKDIPDPKVDPLNVINSLLVVLHEMGPWCTQRAAHHFYQCNEKLKVKTPHERHYLLYCLVSTALIQLYSLCEHAFHRHLGSG: 350
SecStr          :HS   HHHHT  TT TTHHHHS  TTHHHHHHHHHHHHHHHHT HHHHHHHHHHHHHHHHHHHHH   HHHHHHHHHHHHHHHHHHHHHHHHHHHS  TT:    
ExpBur          :ebeeebeeeeeeeeeeeebeebeebbeebeebbebbeebbeebbbbbbbbbbeebeeebeeebeebeeeebeebbbebbebbeebeeebeebbeeeeeee:    
Contact         :b b    b                                            b  bb  bb b         b  bb  b  bb bbb bb         

queryA        -1:----------------------------------------------------------------------------------------------------:  -1
                :                                                                                                    :
8dgi_A_1     351:SDSRQTIERYSSPKVRRLLQTLRCFKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX: 450
SecStr          :  HHHHHHHHS HHHHHHHHHHHTT --------------------------------------------------------------------------:    
ExpBur          :eebbebbeebbbbbbebbbebbeebe--------------------------------------------------------------------------:    

queryA       636:------------------------------------------------------TRALVDALKNWIEGNPKLSFLKPGILTGR----GKTNQNTGMTLPA: 677
                :                                                       * *   *       * * **     * *                 :
8dgi_A_1     451:XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLCALIYCNQNHTARVLFELLAEISRRDPDLKFLRCQYTTDRVADPTTEPKEAELEHRR: 550
SecStr          :-----------------------------------------   EEEE S HHHHHHHHHHHHHHHTT STTTT  EEE       TTT HHHHHHHHHH:    
ExpBur          :-----------------------------------------ebbbbbbbeeebbbbbbeebbbbbbeebeebeebebbebeeeebeeeeeeeebeeeeee:    

queryA       678:QKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLLTS: 743
                :*   *  *    * * ** ***  ****   ****             *  ** **       *  :
8dgi_A_1     551:QEEVLKRFRMH-DCNVLIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQCKGRARAAPAYHVILVA: 615
SecStr          :HHHHHHHHHTT-SSSEEE  GGGTTTS     SEEEESS  SSHHHHHHHHHH  SSS EEEEEE :    
ExpBur          :beebbeebeee-ebbbbbbbbbbbbeeebeebbbbbbbeebebbbbbbbbbbbbbeeebebbbbbe:

Protein Model on 8dgi_A_1_B_1 (TEMPLATE: 8dgi )

Input Residue Numbers for Focused Sites