Protein Model on 7w0f_A_1_F_1 (TEMPLATE: 7w0f )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(RIGI_HUMAN) A 1 (A) polymer(polypeptide(L)) [1476 aa] Dicer-2, isoform A :A1ZAW0_DROME
2 b F 1 (F) polymer(polyribonucleotide) siRNA 298N 299Q(T) 300I(V) 324I(V) 325S(D) 349Q 482T(S) 484S 485L 492D(Q) 635K(E) 636T(R) 637R 662T(V) 663G 664R 665G(N) 698S 699V (identity: 47.4 %/29.7 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:7w0f_A_1 identity=29.7%
queryA       242:KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKF--PQGQKGK-VVFFANQIPVYEQQKSVFSKYFE-RHGYRV--TGISGATAENVPVE: 335
                :*** *** *        * *   *** *****  *        *  *    **   *  *      **            *  *   *    *      *:
7w0f_A_1       7:KPRGYQLRL-VDHLTKSNGIVYLPTGSGKTFVAILVLKRFSQDFDKPIESGGKRALFMCNTVELARQQAMAVRRCTNFKVGFYVGEQGVDDWTRGMWSDE: 105
SecStr          :   TTHHHH-HHHHHHS EEEE  TTS HHHHHHHHHHHT SSSSS GGGT  EEEEE S HHHHHHHHHHHHHT SS EEEE TTTTTTT  HHHHHHH:    
ExpBur          :eeeebbeeb-beebeeebbbbbbebebebebbbbbbbeeeeeebeeeeeeebebbbbbbeeeebbebbbebbeebbebebbebbeeeebeeeeeeebeeb:    
Contact         :                                                           bbb                      bb  bb          

queryA       336:QIVENNDIIILTPQILVNNLKKGTIPSLSIFTLMIFDECHNTSKQHPYN--MIMFNYLDQKLGGSSGPLPQVIGLTAS----------------------: 411
                :     *     * *         *   **     * ****     **    *  *    *        ** * ***                        :
7w0f_A_1     106:--IKKNQVLVGTAQVFLDMVTQ-TYVALSSLSVVIIDECHHGTGHHPFREFMRLFTIANQT------KLPRVVGLTGVLIKGNEITNVATKLKELEITYR: 196
SecStr          :--HHH SEEEE HHHHHHHHHT-TSS GGGEEEEEEESGGG STT HHHHHHHHHHHS SS------S  EEEEEESSS  SS  TTTHHHHHHHHHHHT:    
ExpBur          :--beebebbbbbbebbbebbbb-ebbebebbbbbbbbbbbbbeeeeebbbbbbbbeeeeee------eebebbbbbebbbeeeebeebeebbeebbbbbb:    
Contact         :             b                                                                                      

queryA       412:---VGVGDAKNTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVES-RISDKFKYIIAQLMRDTESL-------AKRICKDLENLSQIQ: 500
                :     * * *       *     *     *     *     ***           *    *     *  *  *   **        *   * * *    *:
7w0f_A_1     197:GNIITVSDTKEMENVMLY-----ATKPTEVMVSFPHQ----EQVLTVTRLISAEIEKFYVSLDLMNIGVQPIRRSKSLQCLRDPSKKSFVKQLFNDFLYQ: 287
SecStr          : EEE  S HHHHHHHHGG-----G   EEEEEEE   ----    HHHHHHHHHHHHHHHHHHT         B TTS SB   HHHHHHHHHHHHHHHH:    
ExpBur          :bebebbeeeeebeeebee-----beebeeeeebbeee----eeeeebbeebeebbeebbeebeeeebeeeeeeeeeebeeeeebeebeebbebbebbeeb:    
Contact         :                                                                          b bbb  b         b        

queryA       501:NREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLYTSHLRKYNDALIISEHARMKDALDYLKD--FFSNVRAAGFDEIEQDLT----QRFEEKL: 594
                :  * *       *         *       *    *              **   *  *       * *             *          ***    :
7w0f_A_1     288:MKEYGIYAASIAIISL---IVEFDIKRRQAETLSVKLM---------HRTALTLCEKIRHL-LVQKLQDMTYDDDDDNVNTEEVIMNFSTPKVQRF----: 370
SecStr          :HHHHBHHHHHHHHHHH---HHHHHHHHHT  SHHHHHH---------HHHHHHHHHHHHHH-HHHHHHHS  S   HHHHHHHHHHHHB HHHHHH----:    
ExpBur          :beebbbbbbbbbbebb---bbbbebeeeebbeeebeeb---------beebbebbeebbee-beeebeebeeeeeeeeebeeebbeebbeebbeeb----:    

queryA       595:QELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTR----ALVDALKNWIEGNPKL-SFLKPGILTGRGKTNQNTGMTLPA--QKCILDAFKA: 687
                :  * *         **  * *                 **  *         * * *   * *   * *    **          *    **     *  :
7w0f_A_1     371:--LMSLKVSFADKDPK--DIC--------------CLVFVERRYTCKCIYGLLLNYIQSTPELRNVLTPQFMVGRNNISPDFESVLERKWQKSAIQQFR-: 451
SecStr          :--HHHHHHHHSS  GG--G  --------------EEEE S HHHHHHHHHHHHHHHHT HHHHTT  EEEE SSS   S SSS S     S HHHHHH-:    
ExpBur          :--bebbeebbeeeeee--ebb--------------bbbbbeeebbbbbbbbbbeebbebbeebeebbebbbbbeeeebeeebeeeeeeeeeeebbebbe-:    
Contact         :                                        bbb                             bbbb                        

queryA       688:SGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLLTSN: 744
                : *  *  *  **  ****   ** *     *       *  ** *    *  * *  :
7w0f_A_1     452:DGNANLMICSSVLEEGIDVQACNHVFILDPVKTFNMYVQSKGRARTTEAKFVLFTAD: 508
SecStr          :HTS  EEEE GGGSSS      SEEEE S    HHHHHHHHHT  STT EEEEEEES:    
ExpBur          :eeebbbbbbbeebbbebebeebbbbbbbbebeebbbbbbbbebbbeeebebbbbbbe:    
Contact         :          bb                                                                                        


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