[pdbjlvh2]Protein Model on 7v6c_A_1_D

Protein Model on 7v6c_A_1_D_1 (TEMPLATE: 7v6c )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(RIGI_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [1540 aa]	Dicer-2, isoform A :A1ZAW0_DROME
2	b		D 1 (F)	polymer(polyribonucleotide)	RNA (5'-R(PCPCPUPCPUPCP*U)-3')	298N 299Q(T) 300I(V) 321V 325S(D) 347T 349Q (identity: 57.1 %/30.7 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:7v6c_A_1 identity=30.7%

queryA       243:PRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKF--PQGQKGK-VVFFANQIPVYEQQKSVFSKYFE-RHGYRV--TGISGATAENVPVEQ: 336
                :** *** *        * *   *** *****  *        *  *    **   *  *      **            *  *   *    *      * :
7v6c_A_1      19:PRGYQLRL-VDHLTKSNGIVYLPTGSGKTFVAILVLKRFSQDFDKPIESGGKRALFMCNTVELARQQAMAVRRCTNFKVGFYVGEQGVDDWTRGMWSDE-: 116
SecStr          :   HHHHH-HHHHHHS EEEE SSSSSHHHHHHHHHHHT TTSSS TTSS  EEEEEESSHHHHHHHHHHHHHH SS EEEE GGGTGGG  HHHHHHH-:    
ExpBur          :eeebbbeb-bebbeeeebbbbbbeeebbebbbbbbbeebbeebeeeeeeebebbbbbbeeeebbeebbebbbeebbbbbbbbbeeeebeeeeeeebeee-:    
Contact         :                                                          bbb                     bb    b           

queryA       337:IVENNDIIILTPQILVNNLKKGTIPSLSIFTLMIFDECHNTSKQHPYN--MIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTDEALDYICKLCASL: 434
                :    *     * *         *   **     * ****     **    *  *    *        ** * ***     *                   :
7v6c_A_1     117:-IKKNQVLVGTAQVFLDMVTQ-TYVALSSLSVVIIDECHHGTGHHPFREFMRLFTIANQT------KLPRVVGLTGVLIKGN------------------: 190
SecStr          :-HHH SEEEEEHHHHHHHHHT-TSS TTTEEEEEEETGGGGSSS HHHHHHHTTTSS SS------S  EEEEEESSSS TT------------------:    
ExpBur          :-beebbbbbbbbebbbebbee-eebebeebbbbbbbbbbebbeeeebeebbeebeeeeee------eebebbbbbebbbeee------------------:    
Contact         :          b b                                                                                       

queryA       435:DASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRI: 534
                :                                                                                                    :
7v6c_A_1      -1:----------------------------------------------------------------------------------------------------:  -1
SecStr          :----------------------------------------------------------------------------------------------------:    
ExpBur          :----------------------------------------------------------------------------------------------------:    

queryA       535:CKALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIE---------------------------------------------------: 583
                :                                                                                                    :
7v6c_A_1     191:-------------------------------------------------EITNVATKLKELEITYRGNIITVSDTKELENVMLYATKPTEVMVSFPHQEQ: 241
SecStr          :-------------------------------------------------  S HHHHHHHHHHHHTS EEB  S SS   STT     EEEEEEE     :    
ExpBur          :-------------------------------------------------ebeebeeebeebbebbebebbbbebeeebebbbbeeeebeeebbebeeeee:    

queryA        -1:----------------------------------------------------------------------------------------------------:  -1
                :                                                                                                    :
7v6c_A_1     242:VLTVTRLISAEIEKFYVSLDLMNIXXXXXXXXXXXXXXXXXSKKSFVKQLFNDFLYQMKEYGIYAASIAIISLIVEFDIKRRQAETLSVKLMHRTALTLC: 341
SecStr          :  HHHHHHHHHHHHHHHHHHHS  -----------------  HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT SSHHHHHHHHHHHHHH:    
ExpBur          :eeebbeebeeebeebbeebeeeee-----------------eebebbeebbebbbbbbeebbbbbbbbbbbbbbbbbbbeebebeeeebeebbeebbebb:    

queryA       584:------------QDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEY-HLNPETIT-ILFVKTR----ALVDALKNWIEGNPKL-SFLKPGILTGR: 664
                :            ** *          * *    *   **       *        *  *    **  *         * * *   * *   * *    * :
7v6c_A_1     342:EKIRHLLVQKL-QDMTXXXXXXXXNTEEVIMNFST--PKVQRFLMSLKVSFADKDPKDICCLVFVERRYTCKCIYGLLLNYIQSTPELRNVLTPQFMVGX: 438
SecStr          :HHHHHHHHHHH-HHH --------  HHHHHHTS --HHHHHHHHHHHHHTSS  TTT  EEEEESSHHHHHHHHHHHHHHHHH TTTTTT    EE  -:    
ExpBur          :eebeeebbeeb-eeee--------eeeebbbebbe--bbbeebbebbbebbeeeeeeebbbbbbbeeeebbbbbbbbbebbbebbeebeebbebbbbee-:    

queryA       665:GKTNQNTGMTLPA--QKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLLTSN: 744
                :          *    **     *   *  *  *  **  ****   ** *     *       *  ** *    *  * *  :
7v6c_A_1     439:XXXXXXXXSVLERKWQKSAIQQFR-DGNANLMICSSVLEEGIDVQACNHVFILDPVKTFNMYVQSKGRARTTEAKFVLFTAD: 519
SecStr          :-------- HHHHHHHHHHHHHHH-TTS SEEEEE  TTS       SEEEE S    HHHHHHHHTT  STT EEEEEEES:    
ExpBur          :--------eebeeebeeebbeebe-eeebbbbbbbbbeeeebebeebebbbbbbebeebbbbbbbbbbbbeeebebbbbbbe:

Protein Model on 7v6c_A_1_D_1 (TEMPLATE: 7v6c )

Input Residue Numbers for Focused Sites