[pdbjlvh2]Protein Model on 7tny_A_1_C

Protein Model on 7tny_A_1_C_1 (TEMPLATE: 7tny )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(RIGI_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [666 aa]	Antiviral innate immune response receptor RIG-I :DDX58_HUMAN
2	b		C 1 (C)	polymer(polyribonucleotide)	p2dsRNA	298N 299Q 300I 301P 325S 326G 347T 349Q 350I 353N 507Q 510E 511Q 514V 518K 546R 635K 637R 662T 663G 664R 665G 678Q 697T 698S 851K 853F 854S 906S (identity: 100.0 %/97.7 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:7tny_A_1 identity=97.7%

queryA       241:FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVEN: 340
                :****************************************************************************************************:
7tny_A_1     241:FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVEN: 340
SecStr          :    HHHHHTTHHHHHT  B  B   SHHHHHHHHHHHHHHHHS  SS    EEEE  SHHHHHHHHHHHHHHSSTT   EEEE TTTSSSS HHHHHTT:    
ExpBur          :eeeeebbeebbebbeeeebbbbbbebbebbbbbbbbbbbebbeeeeeeeebbbbbbbeeeebbeebeeebeeebeeeeeebebbbeeeeeeeebeebbee:    
Contact         :                                                         bbbb                       bb              

queryA       341:NDIIILTPQILVNNLKKGTIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTDEALDYICKLCASLDASVIA: 440
                :****************************************************************************************************:
7tny_A_1     341:NDIIILTPQILVNNLKKGTIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTDEALDYICKLCASLDASVIA: 440
SecStr          : SEEEE HHHHHHHHHHTS S GGG SEEEEBTGGG  TT HHHHHHHHHHHHHHTT      B   BBS    TT  SHHHHHHHHHHHHHHHT SB  :    
ExpBur          :bbbbbbbbebbbebbeeeebeebeebebbbbbbbeebeeeeebbebbbebbebeeeeeeeeebbbbbbbbbbbbeebeeeeebbeebbebbbbbbbbbbb:    
Contact         :      b bb  b                                                                                       

queryA       441:TVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFL: 540
                :****************************************************************************************************:
7tny_A_1     441:TVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFL: 540
SecStr          :   S HHHHHHSS   EEEE      S  HHHHHHHHHHHHHHHHHHTT TTSTTS       TTSHHHHHHHHHHHHHHTT   TTSSSHHHHHHHHHH:    
ExpBur          :bbeeeeebbeebebebeeeeeebeebeeeebeebbbebbeebbebbeeebeebeeebeeeebebbeeebeebbeebbeebbeeeeeeeeebbebbbbbbb:    
Contact         :                                                                  b  bb  b   b                      

queryA       541:YTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALV: 640
                :****************************************************************************************************:
7tny_A_1     541:YTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALV: 640
SecStr          :HHHHHHHHHHHHHHHHHS HHHHHHHHHHHHHHHTTS   HHHHHHHHHHHHHHHHHHHHHH GGG  HHHHHHHHHHHHHHHH TT  EEEE S SHHH:    
ExpBur          :bbebbeebbbbbebbebbbbebbbeebeebbeeeeeeeebebbeebbeebeeebeebeebbeeeebebebbebbbebbeebbeeeeebbbbbbbeeeebb:    
Contact         :     b                                                                                        b b   

queryA       641:DALKNWIEGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFL: 740
                :*************************       **************   **********      ***********************************:
7tny_A_1     641:DALKNWIEGNPKLSFLKPGILTGRGXXXXXXXMTLPAQKCILDAFKXXXDHNILIATSVXXXXXXIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFL: 740
SecStr          :HHHHHHHHT SS  S     B    -------  HHHHHHHHHS  ---  SEEEES  ------    SEEEEET   SS SS  TT  S  S  EEEE:    
ExpBur          :ebbeebbeebeebeebebbebebbe-------eeeeeeeebeeebe---eebbbbbbee------ebebebbbbbbbeeebeebebbebbeeeeebebbb:    
Contact         :                     bbbb            b                  bb                                          

queryA       741:LTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKE: 840
                :****************************************************************************************************:
7tny_A_1     741:LTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKE: 840
SecStr          :E S HHHHHHHHHHHHHHHHHHHHHHHHTTS HHHHHHHHHHHHHHHHHHHHH        B S  EEE SSS  EEEEGGGEEESSSS EEE  SSSTT:    
ExpBur          :bbeeeebbeebeebeebeebbeebbeebeeeeeeebeeebeebbeeeeeeeeeeeeeeeeeeeeebbbbbbbbbbebbebeebbbbeeebbbbeeeebee:    

queryA       841:CFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE: 922
                :**********************************************************************************:
7tny_A_1     841:CFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE: 922
SecStr          :SEEEEE SS    SS  EEEEEEE SSS   EEEEEEESSSSEEEEE GGG EEE SSS  EE  SSSTT  B  EE  TT :    
ExpBur          :ebeeeebeeeeeeeebebebbbbbeeeebebebbbbbebeeeebbbbebebbbbbbeeebebeeeeebeebebeeeebeeee:    
Contact         :          b bb                                                   b

Protein Model on 7tny_A_1_C_1 (TEMPLATE: 7tny )

Input Residue Numbers for Focused Sites