Protein Model on 7nic_A_1_B_1
(TEMPLATE: 
7nic
)Protein Model on 7nic_A_1_B_1
(TEMPLATE: 7nic
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(RIGI_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [683 aa] | Interferon-induced helicase C domain-containing protein 1 :IFIH1_MOUSE | |
| 2 | b | B 1 (X) | polymer(polyribonucleotide) | RNA (5'-R(P*GP*UP*CP*AP*AP*GP*CP*CP*GP*AP*GP*GP*AP*GP*A)-3') | 378S(N) 379K 380Q(E) 381H(A) 507Q 508K(H) 666K(H) 672G(P) 674T 676P(T) 677A(E) 719G(T) 750K(R) 829C(M) 830H 859R(N) 888K 907K (identity: 33.3 %/38.3 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:7nic_A_1 identity=38.3% |
queryA 244:RNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQG-QKGKVVFFANQIPVYEQQ-KSVFSKYFERHGYRVTGISGATAENVPVEQIVENN: 341
:* ** * * ** *** *** *** *** * * ** * * *** * ** * * ** * ** * * :
7nic_A_1 310:RPYQMEVAQPALDGKNIIICLPTGSGKTRVAVYITKDHLDKKKQASESGKVIVLVNKVMLAEQLFRKEFNPYLKK-WYRIIGLSGDTQLKISFPEVVKSY: 408
SecStr : HHHHHHHTTTTSS EEE SSSSHHHHHHHHHHHHHHHHHHTT EEEEESSHHHHHHHHHHTHHHHHTT-TS EE SSS SS HHHHTTTT:
ExpBur :eebbebbbeebbeeebbbbbbebebebbebbbebbbebbeebeeeeeebbbbbbbebebbbebbbeebbeeebee-ebebebbbeeeeeeeebbebbeee:
queryA 342:DIIILTPQILVN---NLKKGTIPS--LSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGS--------SGPLPQVIGLTASVGVGDAKNTDEALDYIC: 428
:* ** * *** * ** * ** * * * **** * * ** ** ** *** **** ***** *** ** ** * :
7nic_A_1 409:DVIISTAQILENSLLNLESGDDDGVQLSDFSLIIIDECHHTNKEAVYNNIMRRYLKQKLRNNDLKKQNKPAIPLPQILGLTASPGVGAAKKQSEAEKHIL: 508
SecStr :SEEEEEHHHHHHHHHHHHHTSS GGG SEEEESSGGG TT HHHHHHHHHHHHHHHHHHHHTT S EE EEES SS SSHHHHHHHHH:
ExpBur :bbbbbbbebbbebbeeeeeeeeebbebeebbbbbbbbbbebeeebebbbbbbebbebbeebeebeeeeeeeeeebbbbbbbbbbbbeebeeeeebbebbb:
Contact : bbbb
queryA 429:KLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDK: 528
: ** *** * *** ** * * * * ** * **** **** * * :
7nic_A_1 509:NICANLDAFTIKTVKENLGQLKHQIKEPCKKFVIADDTRENPFKEKLLEIMASIQTYCQKSPMS----------DFGTQHYEQWAIQMEKKA----AKDG: 594
SecStr :HHHHTTT S STHHHHHHHS B EEEE TTTHHHHHHHHHHHHHHHT S---------- TTSHHHHHHHHHHHHHH----HHHT:
ExpBur :ebbbbbbbeebbbbeeeeeebeeeeeebeeeebebeeeebeebbebbeebbeebbeebeeebee----------ebeeeebbebbeebbeeb----beee:
Contact : bb
queryA 529:DEESRICKALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGF------------------------------DEIEQDLTQRFEEKLQELE: 598
: * * ****** ** * ** ** * * * ** * * * :
7nic_A_1 595:NRKDRVC------AEHLRKYNEALQINDTIRMIDAYSHLETFYTDEKEKKFAVLNXXXXXXXXXXXXXXXXXXXXXXSLKLDETDEFLMNLFFDNKKMLK: 688
SecStr : SSHHH------HHHHHHHHHHHHHHHHS HHHHHHHHHHHHHHHHHHHHHHH ---------------------- SHHHHHHHHHHHHHHHHH:
ExpBur :eeebbbb------bbbbebbbbbbebbeebbbebbbebbeebbeebbebbebbee----------------------eeeebebbeebbeebeeebeebe:
queryA 599:SVSRDPSNENPKLEDLCFILQEEYHLNPETIT-ILFVKTRALVDALKNWIEGNPKLS--FLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILI: 695
: * ** ** * * * * * *** ** ** * * * * * * ** ** * * * **:
7nic_A_1 689:KLAENPKYENEKLIKLRNTILEQFTRSEESSRGIIFTKTRQSTYALSQWIMENAKFAEVGVKAHHLIGAGHSSEVKPMTQTEQKEVISKFR-TGEINLLI: 787
SecStr :HHHS STTS SHHHHHHHHHHHHHHHHSS EEEE S SHHHHHHHHHHHH HHHHHHT EEE SS TT HHHHHHHHHHHH-HTS SEEE:
ExpBur :eebeeeebbbebbeebeebbbebbeebeeebebbbbbeeebbbebbbebbeebeebeeeebebebbbbeeeeeebeebebeebbebbeebe-ebebbbbb:
Contact : b b b bb
queryA 696:ATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLLTSN-AGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKILHIQTH---EKFIR: 791
:** ** ** ** ** ** * * * * * * *** ** * * ** ** * * * *** * * * *** * ** :
7nic_A_1 788:ATTVAEEGLDIKECNIVIRYGLVTNEIAMVQARGRARADESTYVLVTSSGSGVTEREIVNDFREKMKYKAINRVQNMKPEEYAHKILELQVQSILEKKMK: 887
SecStr :E HHHHS S EE BS HHHHHHHHT SSS EE EEEESSSTHHHHHHHHHHHHHHHHHHHHHHHTS HHHHHHHHHHHHHHHHHHHHHH:
ExpBur :bbebbbbbbebeebbbbbbbebbeebbbbbbbbbbbebeebebbbbbbeeeebeeebeebeeebebbeebbeebeebeeeebeeebeebbeebbeeeeee:
Contact : b b
queryA 792:DSQEKPKPVPDKENK-KLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPH-PKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKI: 889
: * * *** * * * *** * ** * * * * ** * * **:
7nic_A_1 888:VKRSIAKQYNDNPSLITLLCKNCSMLVCSGENIHVIEKMHHVNMTPEFKGLYIVRENXXXXXXXXXXQTNGEIIC---KCGQAWGTMMVHKGLDLPCLKI: 984
SecStr :HHTTSSSS SS B EEESSS EEE STTEEEETTTEEEE HHHHTT EEE ---------- S EEE ---SSS EEEEE BTTB EEE G:
ExpBur :eeeeeeeeeeeeeeebebbbbbbeeebbbbeebebbeeeebbbeeeebeeebeeeee----------eeebebbb---ebbbbbbebbebeebebbbbeb:
Contact : bb b b
queryA 890:ESFVVEDIATGVQTLYSKW: 908
: *** * **:
7nic_A_1 985:RNFVVNFKNNSPKKQYKKW:1003
SecStr :GGEE BSSS SST:
ExpBur :ebbbbeeeeeeeeeebeeb:
Contact : b
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[assembly_id:1]
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