Protein Model on 7jl0_C_1_B_1
(TEMPLATE: 
7jl0
)Protein Model on 7jl0_C_1_B_1
(TEMPLATE: 7jl0
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DOWNLOAD: [sequence-replaced 3D model]
[for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(RIGI_HUMAN) | C 1 (A) | polymer(polypeptide(L)) [662 aa] | Interferon-induced helicase C domain-containing protein 1 :IFIH1_HUMAN | |
| 2 | b | B 1 (Y) | polymer(polyribonucleotide) | RNA (5'-R(P*UP*CP*AP*GP*UP*CP*AP*GP*UP*CP*AP*GP*UP*C)-3') | 300I(V) 326G 347T 349Q 350I 353N 514V(I) 546R 635K 636T 637R 662T(I) 663G 697T 698S(T) 699V 827E 829C(M) 830H 878K(V) 880K (identity: 71.4 %/39.0 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:7jl0_C_1 identity=39.0% |
queryA 244:RNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHL-KKFPQGQKGKVVFFANQIPVYEQQKSVFSKYFE---RHGYRVTGISGATAENVPVEQIVE: 339
:* ** * * ** *** *** *** *** * * ** ** *** * ** * * * *** * ** * * :
7jl0_C_1 23:RPYQMEVAQPALEGKNIIICLPTGSGKTRVAVYIAKDHLDKKKKASEPGKVIVLVNKVLLVEQ---LFRKEFQPFLKKWYRVIGLSGDTQLKISFPEVVK: 119
SecStr : HHHHHHHTGGGSS EEEE TTS HHHHHHHHHHHHHHHHHHTT EEEEESSHHHHHH---HHHTTHHHHTTTTS EEE SSS SS HHHHHH:
ExpBur :eebbebbbeebeeeebbbbbbebebebbebbbbbbeebbeeeeeeeeeebbbbbbebebbbeb---beeebbeeebeeebebeebbeeeeeeeebeebbe:
Contact : b b
queryA 340:NNDIIILTPQILVNNLKKGTIP-----SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSG--------PLPQVIGLTASVGVGDAKNTDEALDY: 426
: **** * *** * * ** * * * **** * * ** ** ** *** **** ***** *** * * :
7jl0_C_1 120:SCDIIISTAQILENSLLNLXXXXXAGVQLSDFSLIIIDECHHTNKEAVYNNIMRHYLMQKLKNNRLKKXXXXVIPLPQILGLTASPGVGGATKQAKAEEH: 219
SecStr :H SEEEEEHHHHHHHHS ----- TTS SEEEEESGGG TT HHHHHHHHHHHHHHHHHHHT ---- EEEEEES SS SSHHHHHHH:
ExpBur :ebebbbbbbeebbebbeee-----eebebeebbbbbbbbbbebeeeeebbebbbebbeeeeebeeeee----eeeebbbbbbbbbbbbeebeeeeebeeb:
Contact : b bb b
queryA 427:ICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMP: 526
:* **** *** * *** ** * * * * * ** * * **** **** * :
7jl0_C_1 220:ILKLCANLDAFTIKTVKENLDQLKNQIQEPCKKFAIADXXREDPFKEKLLEIMTRIQTYCQ-----MSPMS-----DFGTQPYEQWAIQMEKKA----AK: 305
SecStr :HHHHHHHHT S S HHHHHHHS EEEEEE -- HHHHHHHHHHHHHHHHHT----- SS----- SSSHHHHHHHHHHHHHH----HH:
ExpBur :bbbbbbbbbbebbbebeeeeeebeeeeeebeeeebebe--eeeebeeebbebbeebbeeee-----beeee-----eeeeeebbebbeeebeeb----be:
Contact : b
queryA 527:DKDEESRICKALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQD-------------------------------LTQRFEEKLQ: 595
: * * ****** ** * ** ** * * * ** * * * :
7jl0_C_1 306:EGNRKERVC------AEHLRKYNEALQINDTIRMIDAYTHLETFYNEEKDKKFAVIEXXXXXXXXXXXXXXXXXXXXXXXXXXXXETDRFLMTLFFENNK: 399
SecStr :HT TTTHHH------HHHHHHHHHHHHHHHHS HHHHHHHHHHHHHHHHHHHHHTT ---------------------------- THHHHHHHHHHHH:
ExpBur :eeeeebbbb------bebbeebbebbebbeebbbebbbeebeeebeebeebbeeeee----------------------------ebeeebbebbeebbe:
Contact : b
queryA 596:ELESVSRDPSNENPKLEDLCFILQEEYHLNPETIT-ILFVKTRALVDALKNWIEGNPKLS--FLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHN: 692
: * * ** ** * * * * * * *** ** ** * * * * * * ** ** * * *:
7jl0_C_1 400:MLKRLAENPEYENEKLTKLRNTIMEQYTRTEESARGIIFTKTRQSAYALSQWITENEKFAEVGVKAHHLIGAGXSSEFKPMTQNEQKEVISKFR-TGKIN: 498
SecStr :HHHHHHT TTS SHHHHHHHHHHHHHHHH S EEEE S HHHHHHHHHHHHHSTHHHHHT EEEE - SS HHHHHHHHHHHH-HTS :
ExpBur :ebeebbeeeeeebebbeebeebbeebbeebeeebbbbbbbeeebbbebbbebbeeeeebeeeebeeebbbeee-eeeeeebeeeebeebbeebe-eeebb:
Contact : bbb bb
queryA 693:ILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLLT-SNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKILHIQTHEKFIR: 791
: **** ** ** ** ** ** * * * * * * *** ** * * * **** * * **** * * *** * :
7jl0_C_1 499:LLIATTVAEEGLDIKECNIVIRYGLVTNEIAMVQARGRARADESTYVLVAHSGSGVIERETVNDFREKMMYKAIHCVQNMKPEEYAHKILELQMQSIMEK: 598
SecStr :EEEE GGGSSS S EEEEES SHHHHHHHHT STT EEEEEE TTSSSHHHHHHHHHHHHHHHHHHHHHTT HHHHHHHHHHHHHHHHHHH:
ExpBur :bbbbbebbbbbbbbeebbbbbbbebeeebbbbbbbbbbbebeebbbbbbbeeeeebeeebeebeebbebbeebbeebeeeeeeebeeebeebbeebeeee:
Contact : bbb
queryA 792:DSQEKPKPVPDKENK----KLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEK-RAKIFCARQNCSHDWGIHVKYKTFEIPV: 886
: * * ** * *** * *** * *** * * * * ** * * :
7jl0_C_1 599:KMKTKRNIAKHYXNNPSLITFLCKNCSVLACSGEDIHVIEKMHHVNMTPEFKELYIVREKXXXXXXXXXXQINGEIIC---KCGQAWGTMMVHKGLDLPC: 695
SecStr :HHHHHHHHHHT - TTS EEEESSS EEEEGGGEEEETTTEEEE SHHHHHSEEE ---------- S EEE ---SSS EEEEEEEETTEEEEB:
ExpBur :eeeeeeeeeeee-eeeeebbbbbbbbeeebbebeebebbeeeebbbebeebeeebeebee----------eeebebbb---ebbbebbebbeeeeeebbb:
Contact : b bb b b
queryA 887:IKIESFVVEDIATGVQTLYSKW: 908
: ** *** * **:
7jl0_C_1 696:LKIRNFVVVFKNNSTKKQYKKW: 717
SecStr : GGGEEEE SSS B SST:
ExpBur :bebebbbbbeeeeeeeebbeeb:
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[assembly_id:1]
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