[pdbjlvh2]Protein Model on 6gkm_A_1_E

Protein Model on 6gkm_A_1_E_1 (TEMPLATE: 6gkm )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(RIGI_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [689 aa]	Interferon-induced helicase C domain-containing protein 1 :IFIH1_MOUSE
2	b		E 1 (A)	non-polymer(ATP)	ADENOSINE-5'-TRIPHOSPHATE	244R 247Q 266T 267G 268C(S) 269G 270K 271T 272F(R) (identity: 77.8 %/38.2 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:6gkm_A_1 identity=38.2%

queryA       244:RNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQG-QKGKVVFFANQIPVYEQQ-KSVFSKYFERHGYRVTGISGATAENVPVEQIVENN: 341
                :* ** * * **  *** *** *** *** *   *   ** *  *    ***    *     **     *  *     **  * ** *         *   :
6gkm_A_1     310:RPYQMEVAQPALDGKNIIICLPTGSGKTRVAVYITKDHLDKKKQASESGKVIVLVNKVMLAEQLFRKEFNPYLKK-WYRIIGLSGDTQLKISFPEVVKSY: 408
SecStr          : HHHHHHHGGGGSS  EEEE  TTS HHHHHHHHHHHHHHHHHHTT    EEEEESSSHHHHHHHHHTTHHHHTT-TS EEEE SSSSTTTTHHHHTTS :    
ExpBur          :eebbeebbeebbeeebbbbbbebebebeebbbebbbbbbeebeeeeeebbbbbbbbeebbbebbeeebbeeebee-ebebbebbeeeeeeeebeebbeee:    
Contact         :b  b                  bbbbbbb                                                                       

queryA       342:DIIILTPQILVN---NLKKGTIPS--LSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGS--------SGPLPQVIGLTASVGVGDAKNTDEALDYIC: 428
                :* ** * *** *   **  *      ** * * * **** * *   ** **  ** ***             ****  ***** *** **   **   * :
6gkm_A_1     409:DVIISTAQILENSLLNLESGDDDGVQLSDFSLIIIDECHHTNKEAVYNNIMRRYLKQKLRNNDLKKQNKPAIPLPQILGLTASPGVGAAKKQSEAEKHIL: 508
SecStr          :SEEEEESHHHHHHHHHHHHSSS    GGG SEEEES GGG  TT TTHHHHHHHHHHHHHHHHHHHH S      EEEEEES     S SSHHHHHHHHH:    
ExpBur          :bbbbbbbebbbebbeeeeeeeeebbebeebbbbbbbbbbebeeeeebbbbbbebbebeeebeebeeeeeeeeeebbbbbbbbbbbbeebeeeeebbebbb:    

queryA       429:KLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDK: 528
                :  ** ***  * *** **  *      * * *          **      *                        **** ****     *        * :
6gkm_A_1     509:NICANLDAFTIKTVKENLGQLKHQIKEPCKKFVIADDTRENPFKEKLLEIMASIQTYCQKSPMS----------DFGTQHYEQWAIQMEKKA----AKDG: 594
SecStr          :HHHHHTT S      SSHHHHHHH    EEEEEEE  S  HHHHHHHHHHHHHHHHHHT    S---------- SSSSHHHHHHHHHHHHH----HHHT:    
ExpBur          :ebbbbbbbeebeebeeeeeebeeebeebeeeeeebeeeebeebeebbeebbeebbeebeeebee----------ebeeeebbebbeebbeeb----beee:    

queryA       529:DEESRICKALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGF------------DEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCF: 616
                :    * *        ****** ** *    ** **   *  *        *            **    *   *      *      *  ** **  *  :
6gkm_A_1     595:NRKDRVC------AEHLRKYNEALQINDTIRMIDAYSHLETFYTDEKEKKFAVLNDSXXSLKLDETDEFLMNLFFDNKKMLKKLAENPKYENEKLIKLRN: 688
SecStr          : TTTHHH------HHHHHHHHHHHHHHTTS HHHHHHHHHHHHHHHHHHHHHHHT  --     HHHHHHHHHHHTTHHHHHHHHS GGG  HHHHHHHH:    
ExpBur          :eeebbbb------bbbbebbbbbbebbeebbbebbbebbeebbeebeebbebbeeee--eeeeeebbeebbeebeeeeeebeeebeeeebbbbbbeebbe:    

queryA       617:ILQEEYHLNPETIT-ILFVKTRALVDALKNWIEGNPKLS--FLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVI: 713
                :   *      *    * * ***    **  **  * *      *   * * *       **   **     *   *  * **** ** ** **  ** **:
6gkm_A_1     689:TILEQFTRSEESSRGIIFTKTRQSTYALSQWIMENAKFAEVGVKAHHLIGAGHSSEVKPMTQTEQKEVISKFR-TGEINLLIATTVAEEGLDIKECNIVI: 787
SecStr          :HHHHHHHHSSS   EEEE S SHHHHHHHHHHHH HHHHHTT  EEEE    S TTS    HHHHHHHHHHHH-HTS SEEEE TTSSSSS     S   :    
ExpBur          :bbeebbeebeeebebbbbbeeeebbebbbebbeeeeebeeeebeeebbbbeeeeeeeeebebeebeebbeebe-ebebbbbbbbebbbbbbebeebbbbb:    

queryA       714:LYEYVGNVIKMIQTRGRGRARGSKCFLLTSN-AGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKILHIQTHEKFIRDSQEKPKPVPDKENKK-----: 807
                : *  * * * * * *** **  *   * **   ** * *  *   ****   * * *         ***  *                    *       :
6gkm_A_1     788:RYGLVTNEIAMVQARGRARADESTYVLVTSSGSGVTEREIVNDFREKMMYKAINRVQNMKPEEYAHKILELQV-QSILEKKMKVKRSIAXXYNDNPSLIT: 886
SecStr          : BS    HHHHHHHHTT  SSS EEEEEEESSS  HHHHHHHHHHHHHHHHHHHHHHTS HHHHHHHHHHHHH-HHHHHHHHHHHHHH --    SS EE:    
ExpBur          :bbebbeebbbbbbbbbbbbeeebbbbbbbbeeeebeeebeebeeebeebeebbeebeebeeeebeeebeebbe-ebbeeeeeeeeeeee--eeeeeeebe:    

queryA       808:LLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPK-PKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYS: 906
                :***  *  * *      ***  *       **     *      *          * *    *   **     *    *  **  ***          * :
6gkm_A_1     887:LLCKNCSMLVCSGENIHVIEKMHHVNMTPEFKGLYIVRENKALQKXXXDYQTNGEIIC---KCGQAWGTMMVHKGLDLPCLKIRNFVVNFKNNSPKKQYK: 983
SecStr          :EEETTTTEEEEETTTEEEETTTEEEE  HHHHTS EE   STTT ---    S EEE ---SSS EEEE   BTTB   B  SSSEEEEETTT      S:    
ExpBur          :bbbbbbeeebbebeebbbbeeeebbbebeebeeebeebebeeeee---eeeeebebbb---ebbbbbbebbebeeeebbbbebebbbbeeeeeeebebbe:    

queryA       907:KW: 908
                :**:
6gkm_A_1     984:KW: 985
SecStr          :SS:    
ExpBur          :eb:

Protein Model on 6gkm_A_1_E_1 (TEMPLATE: 6gkm )

Input Residue Numbers for Focused Sites