Protein Model on 6g1s_A_1_B_1
(TEMPLATE: 
6g1s
)Protein Model on 6g1s_A_1_B_1
(TEMPLATE: 6g1s
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(RIGI_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [645 aa] | Interferon-induced helicase C domain-containing protein 1 :IFIH1_MOUSE | |
| 2 | b | B 1 (X) | polymer(polyribonucleotide) | RNA (5'-R(P*UP*CP*CP*AP*UP*GP*CP*GP*CP*AP*UP*GP*AP*CP*G)-3') | 379K 380Q(E) 381H(A) 508K(H) 511Q 666K(H) 671T(K) 674T 676P(T) 718V 720N 830H 859R(N) 907K (identity: 50.0 %/37.7 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:6g1s_A_1 identity=37.7% |
queryA 244:RNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQG-QKGKVVFFANQIPVYEQQ-KSVFSKYFERHGYRVTGISGATAENVPVEQIVENN: 341
:* ** * * ** *** *** *** *** * * ** * * *** * ** * * ** * ** * * :
6g1s_A_1 1:RPYQMEVAQPALDGKNIIICLPTGSGKTRVAVYITKDHLDKKKQASESGKVIVLVNKVMLAEQLFRKEFNPYLKK-WYRIIGLSGDTQLKISFPEVVKSY: 99
SecStr : HHHHHHHGGGGSS TTS HHHHHHHHHHHHHHHHHHHT EE S HHHHHHHHHHTSHHHHTT-TS B SSS SS HHHHHHS :
ExpBur :eebbeebbeebeeeebbbbbbeeebeebebbbebbeebbeebeeeeeebbbbbbbeeebbbeebeeebbbeebee-ebebbebbeeeeeeeebbebbebe:
queryA 342:DIIILTPQILVN---NLKKGTIPS--LSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGS--------SGPLPQVIGLTASVGVGDAKNTDEALDYIC: 428
:* ** * *** * ** * ** * * * **** * * ** ** ** *** **** ***** *** ** ** * :
6g1s_A_1 100:DVIISTAQILENSLLNLESGDDDGVQLSDFSLIIIDECHHTNKEAVYNNIMRRYLKQKLRNNDLKXXXXXAIPLPQILGLTASPGVGAAKKQSEAEKHIL: 199
SecStr :SEEB HHHHHHHHHHHHTSSS GGG SEE S GGG SSS TTSHHHHHHHHHHHHHHHH ----- EE SS S SSHHHHHHHHH:
ExpBur :ebbbbbbeebbebbeeeeeeeeebbebeebbbbbbbbbbebeeeeebbbbbbbbbebeeebeeee-----eeeebbbbbbbbebbbeebeeeeebeebbb:
Contact : bbb
queryA 429:KLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDK: 528
: ** *** * *** ** * * * * ** * **** **** * * :
6g1s_A_1 200:NICANLDAFTIKTVKENLGQLKHQIKEPCKKFVIAXXXXXNPFKEKLLEIMASIQTYCQKSPMS----------DFGTQHYEQWAIQMEKKA----AKDG: 285
SecStr :HHHHHHT S TTHHHHHHH ----- HHHHHHHHHHHHHHHHTT SS---------- SSSSHHHHHHHHHHHHH----HHHT:
ExpBur :bbbbbbbbeebebbeeeeeebeeebeeeeeeeeee-----eebeeebeebbeebbeebebeeee----------eeebeebbebbeebbeeb----beeb:
Contact : b b
queryA 529:DEESRICKALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGF------------DEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCF: 616
: * * ****** ** * ** ** * * * ** * * * * ** * :
6g1s_A_1 286:NRKDRVC------AEHLRKYNEALQINDTIRMIDAYSHLETFYTDEKEKKFAVLNXXXXXXXXDETDEFLMNLFFDNKKMLKKLAENPKXXXEKLIKLRN: 379
SecStr : TTTHHH------HHHHHHHHHHHHHHTTS HHHHHHHHHHHHHHHHHHHHHHH -------- HHHHHHHHHHHHHHHHHHHHHTS --- HHHHHHH:
ExpBur :eeeebbb------bbbbebbbbbbebbeebbbebbbebbbebbeeeeebeeebee--------eebbeebeebbeebeeebeeebeeee---ebbeebee:
queryA 617:ILQEEYHLN-PETITILFVKTRALVDALKNWIEGNPK--LSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVI: 713
: * * * *** ** ** * * * * * * ** ** * * **** ** * ** ** **:
6g1s_A_1 380:TILEQFTRSXXXSRGIIFTKTRQSTYALSQWIMENAKXXXXXVKAHHLIGAGHSSEVKPMTQTEQKEVISKFR-TXXINLLIATTVAXXGLDIKECNIVI: 478
SecStr :HHHHHHHH --- EEEE S HHHHHHHHHHHHHS ----- EEE TT HHHHHHHHHHHH- -- EEE STT -- S S EE:
ExpBur :bbeebbeee---ebbbbbbeebebbebbbebbeeeee-----eeeebbbbeeeeeeeebbeeeebeebbeebe-e--bbbbbbbebb--ebebeebbbbb:
Contact : b b b b
queryA 714:LYEYVGNVIKMIQTRGRGRARGSKCFLLTSN-AGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKILHIQTH---EKFIRDSQEKPKPVPDKENK-KL: 808
: * * * * * * *** ** * * ** ** * * * **** * * * *** * ** * * *:
6g1s_A_1 479:RYGLVTNEIAMVQARGRARADESTYVLVTSSXXGVTEREIVNDFREKMMYKAINRVQNMKPEEYAHKILELQVQSILEKKMKVKRSIAKQYNDNPSLITL: 578
SecStr :EBS HHHHHHHHHH SS B -- HHHHHHHHHHHHHHHHHHHHHHTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHS SS EE:
ExpBur :bbbbebebbebbebbbbbbeeebbbbbbbee--eeeeebeebeeeeebbeebbeebeeeeeeebeeebeebbeebbeeeeeeeeeeeeeeeeeeeeebeb:
Contact : b b
queryA 809:LCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEK-RAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSK: 907
:** * * * *** * ** * * * * ** * * ** *** * *:
6g1s_A_1 579:LCKNCSMLVCSGENIHVIEKMHHVNMTPEFKGLYIVRENKXXXXXXXXXXTNGEIIC---KCGQAWGTMMVHKGLDLPCLKIRNFVVNFXXXSPKKQYKK: 675
SecStr :E SSS EEEETTT EEETTTEEE STTGGGT EEE ---------- EEE ---SSS EEEEEEEETTEEEEEE GGG EEE --- SS:
ExpBur :bbbbbeeebbebeebebbeeeebbbbeeebeeebeeeeee----------eebebbb---eebbebbebeebeebebbbbebeebbbee---eebebbee:
Contact : b b b
queryA 908:W: 908
:*:
6g1s_A_1 676:W: 676
SecStr :G:
ExpBur :b:
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[assembly_id:1]
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