Protein Model on 6g19_A_1_B_1
(TEMPLATE: 
6g19
)Protein Model on 6g19_A_1_B_1
(TEMPLATE: 6g19
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(RIGI_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [682 aa] | Interferon-induced helicase C domain-containing protein 1 :IFIH1_MOUSE | |
| 2 | b | B 1 (X) | polymer(polyribonucleotide) | RNA (5'-R(P*CP*AP*AP*GP*CP*CP*GP*AP*GP*GP*AP*GP*AP*G)-3') | 379K 380Q(E) 381H(A) 507Q 508K(H) 666K(H) 674T 676P(T) 718V 719G(T) 720N 750K(R) 829C(M) 830H 859R(N) 875I(T) 888K 907K 908W (identity: 47.4 %/38.6 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:6g19_A_1 identity=38.6% |
queryA 244:RNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQG-QKGKVVFFANQIPVYEQQ-KSVFSKYFERHGYRVTGISGATAENVPVEQIVENN: 341
:* ** * * ** *** *** *** *** * * ** * * *** * ** * * ** * ** * * :
6g19_A_1 4:RPYQMEVAQPALDGKNIIICLPTGSGKTRVAVYITKDHLDKKKQASESGKVIVLVNKVMLAEQLFRKEFNPYLKK-WYRIIGLSGDTQLKISFPEVVKSY: 102
SecStr : HHHHHHHGGGGSS EEEE TTS HHHHHHHHHHHHHHHHHHTT EEEEESSSHHHHHHHHHTHHHHHTT-TS EEEE TTSSTTTTHHHHTTS :
ExpBur :eebbeebbeebbeeebbbbbbeeebeeeebbbbbbbbbbeeeeeeeeebbbbbbbeeebbbebbeeebbeeebee-ebebbebbeeeeeeeebeebbeee:
queryA 342:DIIILTPQILVN---NLKKGTIPS--LSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGS--------SGPLPQVIGLTASVGVGDAKNTDEALDYIC: 428
:* ** * *** * ** * ** * * * **** * * ** ** ** *** **** ***** *** ** ** * :
6g19_A_1 103:DVIISTAQILENSLLNLESGDDDGVQLSDFSLIIIDECHHTNKEAVYNNIMRRYLKQKLRNNDLKKXXXXAIPLPQILGLTASPGVGAAKKQSEAEKHIL: 202
SecStr :SEEEEEHHHHHHHHHHHHHSSS GGG SEEEEE GGG STT TTTHHHHHHHHHHHHHHHHH ---- EEEEES S SSHHHHHHHHH:
ExpBur :bbbbbbbebbbebbeeeeeeeeebbebeebbbbbbbbbbebeeeeebbbbbbebbebeeebeeeee----eeeebbbbbbbbbbbbeebeeeeebbebbb:
Contact : bbb
queryA 429:KLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDK: 528
: ** *** * *** ** * * * * ** * **** **** * * :
6g19_A_1 203:NICANLDAFTIKTVKENLGQLKHQIKEPCKKFVIADDTRENPFKEKLLEIMASIQTYCQKSPMS----------DFGTQHYEQWAIQMEKKA----AKDG: 288
SecStr :HHHHHTT S SSHHHHHHHS EEEEEE TTHHHHHHHHHHHHHHHHT SS---------- SSSSHHHHHHHHHHHHH----HHHT:
ExpBur :ebbbbbbbeebeebeeeeeebeeeeeebeeeeeebeeeeeeebeebbeebbeebbeebeeebee----------ebeeeebbebbeebbeeb----beee:
Contact : bb
queryA 529:DEESRICKALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGF------------DEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCF: 616
: * * ****** ** * ** ** * * * ** * * * * ** ** * :
6g19_A_1 289:NRKDRVC------AEHLRKYNEALQINDTIRMIDAYSHLETFYTDEKEKKFAVLNXXXXXXKLDETDEFLMNLFFDNKKMLKKLAENPKYENEKLIKLRN: 382
SecStr : SSHHH------HHHHHHHHHHHHHHHHS HHHHHHHHHHHHHHHHHHHHHHH ------ HHHHHHHHHHHHHHHHHHHHHS GGG SHHHHHHH:
ExpBur :eeebbbb------bbbbebbbbbbebbeebbbebbbebbeebbeebeebbeebee------eeeebbeebbeebeeeeeebeeebeeeebebbbbeebbe:
queryA 617:ILQEEYHLNPETIT-ILFVKTRALVDALKNWIEGNPKLS--FLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVI: 713
: * * * * *** ** ** * * * * * * ** ** * * * **** ** ** ** ** **:
6g19_A_1 383:TILEQFTRSEESSRGIIFTKTRQSTYALSQWIMENAKFAEVGVKAHHLIGAGHSSEVKPMTQTEQKEVISKFR-TGEINLLIATTVAEEGLDIKECNIVI: 481
SecStr :HHHHHHHHH S EEEE S HHHHHHHHHHHHHSHHHHHTT EE S TTS HHHHHHHHHHHH-HTS SEEEESTTSSSSS SEE :
ExpBur :bbeebbeeeeeebebbbbbeebebbebbbebbeeeeebeeeebeeebbbbeeeeeeeeebebeebeebbeebe-ebebbbbbbbebbbbbbebeebbbbb:
Contact : b b b
queryA 714:LYEYVGNVIKMIQTRGRGRARGSKCFLLTSN-AGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKILHIQTH---EKFIRDSQEKPKPVPDKENK-KL: 808
: * * * * * * *** ** * * ** ** * * * **** * * * *** * ** * * *:
6g19_A_1 482:RYGLVTNEIAMVQARGRARADESTYVLVTSSGSGVTEREIVNDFREKMMYKAINRVQNMKPEEYAHKILELQVQSILEKKMKVKRSIAKQYNDNPSLITL: 581
SecStr : BS HHHHHHHHTT SSS EEEEEE SSS HHHHHHHHHHHHHHHHHHHHHHTS HHHHHHHHHHHHHHHHHHHHHHHHS S S TTSEEE:
ExpBur :bbebbeebbbbbbbbbbbbeeebbbbbbbbeeeebeeebeebeeebeebeebbeebeebeeeebeeebeebbeebbeeeeeeeeeeeeeeeeeeeeebeb:
Contact : bbb b
queryA 809:LCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPK-PKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSK: 907
:** * * * *** * ** * * * * * ** * * ** *** * *:
6g19_A_1 582:LCKNCSMLVCSGENIHVIEKMHHVNMTPEFKGLYIVRENKALQKXXXXYQTNGEIIC---KCGQAWGTMMVHKGLDLPCLKIRNFVVNFKNNSPKKQYKK: 678
SecStr :EETTTTEEEEETTTEEEETTTEEEE HHHHHH EEE STTT ---- SS EEE ---SSS B EE BTTB EE SSSEEEEETTT SS:
ExpBur :bbbbbeeebbebeebbbbeeeebbbebeebeeebeebebeeeee----eeeebebbb---ebbbbbbebbebeeeebbbbebebbbbeeeeeeebebbee:
Contact : bb b b b b b
queryA 908:W: 908
:*:
6g19_A_1 679:W: 679
SecStr :S:
ExpBur :b:
Contact :b
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[assembly_id:1]
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