Protein Model on 6bu9_A_1_B_1 (TEMPLATE: 6bu9 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)		 type description a(query A)
1 a A(RIGI_HUMAN) A 1 (A) polymer(polypeptide(L)) [399 aa] Dicer-2, isoform A :A1ZAW0_DROME
2 b B 1 (B) polymer(polyribonucleotide) RNA (5'-R(*GP*GP*AP*GP*GP*UP*AP*GP*UP*AP*GP*GP*UP*UP*GP*UP*AP*UP*AP*GP*UP*AP*GP*U)-3') 376N(H) (identity: 0.0 %/30.3 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:6bu9_A_1 identity=30.3%
queryA       241:FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKF--PQGQKGK-VVFFANQIPVYEQQKSVFSKYFE-RHGYRVTGISGATAENVPVEQ: 336
                : *** *** *        * *   *** *****  *        *  *    **   *  *      **            *  *               :
6bu9_A_1       8:IKPRGYQLRL-VDHLTKSNGIVYLPTGSGKTFVAILVLKRFSQDFDKPIESGGKRALFMCNTVELARQQAMAVRRCTNFKVGFYVGXXXXXXWTRGMWSD: 106
SecStr          :S   HHHHHH-TTTTSSS   EE  TTS HHHHHHHHHHHHHTTTTTT SSS      B S SHHHHHHTTTTTTTSSS B     ------ TTTTS T:    
ExpBur          :eeebebbebb-beeeeeebbbebeebeeebeebebbbebbbeeeebeeeeeeebbeebbbeeeebbeeebeebbeebeeeeeeeee------eeeebeee:    

queryA       337:IVENNDIIILTPQILVNNLKKGTIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTDEALDYICKLCASLDA: 436
                :    *     * *             **     * ****                                                             :
6bu9_A_1     107:EIKKNQVLVGTAQXXXXXXXX-XXXALSSLSVVIIDECHH------------------------------------------------------------: 145
SecStr          :TT  S B  BS  ------------ TTS SEEEETTGGG------------------------------------------------------------:    
ExpBur          :eeeebbbbbbeee------------eeeebebeeeeeeee------------------------------------------------------------:    
Contact         :                                       b                                                            

queryA       437:SVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICK: 536
                :                                                                                                    :
6bu9_A_1      -1:----------------------------------------------------------------------------------------------------:  -1
SecStr          :----------------------------------------------------------------------------------------------------:    
ExpBur          :----------------------------------------------------------------------------------------------------:    

queryA       537:ALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKT: 636
                :                                                                                                    :
6bu9_A_1      -1:----------------------------------------------------------------------------------------------------:  -1
SecStr          :----------------------------------------------------------------------------------------------------:    
ExpBur          :----------------------------------------------------------------------------------------------------:    

queryA       637:RALVDALKNWIEGNPKLSFLKPGILTGRGKTNQNTGMTLPA-----------------------------------------------------------: 677
                :                                                                                                    :
6bu9_A_1     146:-----------------------------------------GXXXXXXXXXXXXXXXXXXXXXPRVVGLTGXXXXXXXXTNVATKLKELEITYRGNIITV: 204
SecStr          :----------------------------------------- --------------------- EEEEEE -------- HHHHHHHHHHHHHHTT  S :    
ExpBur          :-----------------------------------------e---------------------ebbeeeee--------eeeeeeeeeeeeebeeebeee:    

queryA        -1:----------------------------------------------------------------------------------------------------:  -1
                :                                                                                                    :
6bu9_A_1     205:SDTKEMENVMLYATKPTEVMVSFPHQEQVLTVTRLISAEIEKFYVSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIYAASIAIIS: 304
SecStr          :B   S  HHHHHHS          S SS  TTHHHHHHHHHHHHTT ------------------------------------------- HHHHHHHHH:    
ExpBur          :beeeeeeeeeeeebeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee-------------------------------------------eeeeeeeeee:    

queryA        -1:----------------------------------------------------------------------------------------------------:  -1
                :                                                                                                    :
6bu9_A_1     305:LIVEFDIKRRQAETLSVKLMHRTALTLCEKIRHLLVQKLQDMTYDDDDDNVNTEEVIMXXXXXXXXXXXXXXXXXXXXXXXXXXCCLVFVERRYTCKCIY: 404
SecStr          :HHHHHHHHHHHHHH SSSHHHHHHHHHHHHHHHH   HHHHHHHHHHHHHHHHHSS  --------------------------  EEE S HHHHHHHH:    
ExpBur          :eeebeeebeebeeeeeeebbebbeeeebeeeeeeeeeeeeeeebeeeeeebeeebeee--------------------------eeeebbebebebebeb:    

queryA       678:-----------------------------------------QKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGS: 736
                :                                         **     *   *  *  *  **  ****   ** *             *  ** *    :
6bu9_A_1     405:GLLLNYIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKW-QKSAIQQFR-DGNANLMICSSVLEEGIDVQACNHVFILDPXXXFNMYVQSKGRARTTEA: 502
SecStr          :HHHHH  ------------------------------- H-HHHHHHTTT-TS  S  EE SGGGSS   SS   EEES  --- HHHHHHHTSS  S  :    
ExpBur          :eeeeeee-------------------------------ee-eeeeeeebe-eeeeeeeeeeeeebeeeeeeebebebeeee---eeeeeeeeebebeeee:    

queryA       737:KCFLLT: 742
                :*  * *:
6bu9_A_1     503:KFVLFT: 508
SecStr          :      :    
ExpBur          :ebeeee:

Input Residue Numbers for Focused Sites

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