Protein Model on 5jb2_A_1_H_1 (TEMPLATE: 5jb2 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)		 type description a(query A)
1 a A(RIGI_HUMAN) A 1 (A) polymer(polypeptide(L)) [670 aa] LGP2 :G0YYQ5_CHICK
2 b H 1 (X) non-polymer(MG) MAGNESIUM ION 890E(K) (identity: 0.0 %/34.6 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:5jb2_A_1 identity=34.6%
queryA       245:NYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG-KVVFFANQIPVYEQQKSVFSKYFE--RHGYRVTGISGATAENVPVEQIVENN: 341
                : ****   **  * * *   *** ***      *  **     *  *  *    *      *      * *   *    **  **         *     :
5jb2_A_1      11:GYQLEAVAPALRGRNSIVWLPTGAGKTRAAVHVCRRHL----EGRRGGRVAVLVNKVHLVQQH---LEKEFHVLRDAFKVTAVSGDSSHKCFFGQLAKGS: 103
SecStr          :HHHHHHTHHHHTT  EEEE  TTS HHHHHHHHHHHHH----HTSSS  EEEEESSTHHHHHH---HHHTGGGGGGTS    B TTTGGGS HHHHHHT :    
ExpBur          :ebbebbbebbeeeebbbbbbeeebebbebbbbbbbebb----eeeeebebbbbbeeebbbebb---beebbeebeeebebeebbeeeeeeeebbeebeeb:    

queryA       342:DIIILTPQILVNNLKKGTIPS---LSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTDEALDYICKLCASLDASV: 438
                :*  * * *** * *  *       *  * *   **** * *   ** **  **  ** *    ***  ***** * *       *   *   ** **  *:
5jb2_A_1     104:DVXICTAQILQNALLSGEEEARVELTDFSLLVIDECHHTQKEAVYNKIMLSYLQKKLSGQR-DLPQILGLTASPGTGGETSFEGAVEHILQICANLDTEV: 202
SecStr          :  - EEHHHHHHHHH  STTT   GGG SEEEETTGGG STTSHHHHHHHHHHHHHHTT  -   EEEEEES    TT  SHHHHHHHHHHHHHHTT SE:    
ExpBur          :eb-bbbbebbbebbebeeeebebebeebbbbbbbbbbebeeeeebbebbbebbeeeeeeee-ebbbbbbbbbbbbbeeeeeeebbbebbbebbbbbbbee:    

queryA       439:IATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKAL: 538
                :**        *   *  * *       *  * *       *         *    *     **  **** *** **                  * *   :
5jb2_A_1     203:IASAQEHAQHLQSHVPQPTKQYDLCQEREQDPFGQRLKKIM-------AQIQEHMEMPELPQN--FGTQVYEQRIVELENRAA----------ERFCRKT: 283
SecStr          :EE  STTHHHHHTTS   EEEEEEE   S  HHHHHHHHHH-------HHHHHHHT SS    -- SSHHHHHHHHHHHHHHH----------HTT HHH:    
ExpBur          :bbbbeeeeeebeeebeebeeeebebeebeebbbbeebeebb-------eebbeebeeeebeee--beeeebbeebeebbeebb----------eeeeeeb:    

queryA       539:FLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRA: 638
                :     *** ***** *    ** **   *  *         *  *  *   ***    *     *   *** *  *  ****          * * *** :
5jb2_A_1     284:RVCALHLRRYNDALLINDTVRMMDAFQCLQQFYAD-KXXXKDPTERFLATTFEENRATLQALAGDQRYENPRLSKLEEILQEHFQPPGSSRGIVFTKTRQ: 382
SecStr          :HHHHHHHHHHHHHHHHHHHS HHHHHHHHHHHHH - ---  HHHHHHHHHHHHHHHHHHHHHT GGG  HHHHHHHHHHHHHS STT   EEEE SSHH:    
ExpBur          :bbbbebbeebbbbbebbeebbbebbbebbeebbee-e---eeebeeebeebbeebeeebeebbeeeebebebbeebbebbeeebeeeeebbbbbbbeeee:    

queryA       639:LVDALKNWIEGNPKL--SFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGS: 736
                :    *  *      *         *** *  **  ***   *      *   *  * *  **** ** **  ** *  *    * * * *  ** **  *:
5jb2_A_1     383:SAHSLLSWLQDTAGLCGQHIRAAVLTGSGHSNQAKGMTQNEQQDVITLFR-YGELNLLFSTSVAEEGLDIPECNIVVRYGLMTNEIAMVQAQGRARAQNS: 481
SecStr          :HHHHHHHHHHT TTTTTS   EEEE  S   SS     HHHHHHHHHHHH-TTSS EEEE GGGSSS   TT  EEEEES    HHHHHHHHTT  STT :    
ExpBur          :bbebbbebbeebeebeebebebbbbbbeeeeeebeebbeeebbebbeebb-ebebbbbbbbebbbbbbebeebebbbbbebeeebbbbbbbbbbbbbeeb:    

queryA       737:KCFLLT-SNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKILHIQTHE------KFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEEC: 829
                :    *   *      ** *      *   *   *   *   * **   *         *  * *       **       *  *    *   * *  *  :
5jb2_A_1     482:MYSVLAKANSREVYREQLNESLVGLMERAIRAVQAMPERKYRLKIVELQRNAVLSWQVKEARSSERRQLHDPD--DVYFHCVNCNVAVCRGSDIRTVEAM: 579
SecStr          :EEEEEEETT HHHHHHHHHHHHHHHHHHHHHHHHHS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSS GG--G EEEETTT  EEEEGGGEEEETTT:    
ExpBur          :bbbbbbbeebeebeebeebeebbebbeebbeebeebeeeebeebbeebbeebbeeeeeeeeeeeeeeeebeee--ebebbbbebeeebbebebbbbbeee:    

queryA       830:HYTVLGDAFKECFV---SRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHF: 913
                :*       *           *     *   *    * *    *   **    *     *   *  ***          * **    *:
5jb2_A_1     580:HHVNINPNFRFYYTVSSGKIHFE-RTFRDWEPGCRIVCS--ECRQEWGMEMIYRNVTLPILSIKNFVV--VTPDEKKKYKKWSTVTF: 661
SecStr          :EEEE  TTGGGTEEE SS    S-S  SSEEEEEEEEET--TT  EEEEEEEETTEEEEEE GGGEEE--E SS EE  S STT SS:    
ExpBur          :ebbbeeeebeeebeeeeeeeeee-eeeeebebbbebbbe--eeebebeebbebeebebbbbebebbbb--bbeeeeebbeebeebbb:    
Contact         :                                                               b

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