Protein Model on 5f9f_G_1_EA_1 (TEMPLATE: 5f9f )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)		 type description a(query A)
1 a A(RIGI_HUMAN) G 1 (G) polymer(polypeptide(L)) [669 aa] Probable ATP-dependent RNA helicase DDX58 :DDX58_HUMAN
2 b EA 1 (G) non-polymer(BU3) (R,R)-2,3-BUTANEDIOL 329A 330E 350I 353N 354N (identity: 100.0 %/98.0 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:5f9f_G_1 identity=98.0%
queryA       240:PFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVE: 339
                :****************************************************************************************************:
5f9f_G_1      10:PFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVE: 109
SecStr          :     HHHHHHHHHHHTT  EEEE  TTS HHHHHHHHHHHHHHTS TT    EEEE SSHHHHHHHHHHHHHHHGGGT  EEEE GGG TTS HHHHHH:    
ExpBur          :eeeeeebbebbbebbeeeebbbbbbebebeeebbbbbbbeebbeeeeeeeebbbbbbbeeeebbeebeeebeeebeeeeeebebbbeeebeeeebeeebe:    
Contact         :                                                                                         bb         

queryA       340:NNDIIILTPQILVNNLKKGTIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTDEALDYICKLCASLDASVI: 439
                :****************************************************************************************************:
5f9f_G_1     110:NNDIIILTPQILVNNLKKGTIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTDEALDYICKLCASLDASVI: 209
SecStr          :T SEEEE HHHHHHHHHHTSS  GGG SEEEEETGGG STT HHHHHHHHHHHHHHSS  S   EEEEEES     S  SHHHHHHHHHHHHHHTT  EE:    
ExpBur          :ebbbbbbbbebbbebbeeeebeebeebebbbbbbbbebeeeebbbebbbebbebeeeeeeeeebbbbbbbbbbbbeebeeeeebbeebbbbbbebbbbbb:    
Contact         :          b  bb                                                                                     

queryA       440:ATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALF: 539
                :****************************************************          **************************************:
5f9f_G_1     210:ATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRDTESLAKRICKXXXXXXXXXXREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALF: 309
SecStr          :E   TTHHHHHHHS   EEEEEE    S  HHHHHHHHHHHHHHHHHHHH  ----------  SSSHHHHHHHHHHHHHHTT   SSHHHHHHHHHHHH:    
ExpBur          :bbbeeeeeebeeebeebebeeeebeebeeeebeebbbebbeebbebbeeeee----------eebeeeebeeebeeebeebbeeeeeeeeebbebbbbbb:    

queryA       540:LYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRAL: 639
                :****************************************************************************************************:
5f9f_G_1     310:LYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRAL: 409
SecStr          :HHHHHHHHHHHHHHHHHHS HHHHHHHHHHHHHHHTTS   HHHHHHHHHHHHHHHHHHHHHH TTS  HHHHHHHHHHHHHHHH TT  EEEE S HHH:    
ExpBur          :bbbebbeebbbbbebbebbbbebbbeebeebbeebeeeeeeebbeebbeebeebeeebeebbeeeebebebbebbbebbeebbeeeeebbbbbbbeeeeb:    

queryA       640:VDALKNWIEGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCF: 739
                :****************************************************************************************************:
5f9f_G_1     410:VDALKNWIEGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCF: 509
SecStr          :HHHHHHHHHH GGGTT   EEE     TTSS S  HHHHHHHHHSBSTTSSBSEEEE   SSS S  S  SEEEEES    HHHHHHHGGG  STT EEE:    
ExpBur          :bebbeebbeebeebeebebbbbbeeeeeeeeeebeeeebeebeebbeeeeeebbbbbbebebbbeebeebebbbbbbbeeebbbbbbbbbbbbeeebebb:    

queryA       740:LLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFK: 839
                :*******************************************************    *****************************************:
5f9f_G_1     510:LLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKILHIQTHEKFIRDSQXXXXPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFK: 609
SecStr          :EEESSHHHHHHHHHHHHHHHHHHHHHHHHTTS HHHHHHHHHHHHHHHHHHHHH ----   B S EEEEETTT  EEEETTTEEEETTTEEEE SSSGG:    
ExpBur          :bbbbeeebbeebeebeebbebbeebbeebeeeeeeebeeebeebbeeebeeeeee----eeeeeeebebbbbbbbbebbebeebbbbeeeebbbeeeebe:    

queryA       840:ECFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE: 922
                :***********************************************************************************:
5f9f_G_1     610:ECFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE: 692
SecStr          :GTEEEEE SS  EETTEEEEEEEEE GGG   EEEEEEEETTEEEEEE GGGEEEEETTT  EEE SSGGG  B   B  TT :    
ExpBur          :eebeeeebeeeeeeeebebebbbbbeeeebebbbbbebbbeeeebbbbebebbbbbbeeeeebeeeeebeebebeeeebeeee:

Input Residue Numbers for Focused Sites

ex) 2,15,123