Protein Model on 5e3h_A_1_J_1 (TEMPLATE: 5e3h )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)		 type description a(query A)
1 a A(RIGI_HUMAN) A 1 (A) polymer(polypeptide(L)) [642 aa] Probable ATP-dependent RNA helicase DDX58 :DDX58_HUMAN
2 b J 1 (A) non-polymer(BEF) BERYLLIUM TRIFLUORIDE ION 266T 270K 373E 410A 702E (identity: 100.0 %/94.1 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:5e3h_A_1 identity=94.1%
queryA       241:FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVEN: 340
                :****************************************************************************************************:
5e3h_A_1      11:FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVEN: 110
SecStr          :    HHHHHHHHHHHTT  EEEE  TTS HHHHHHHHHHHHHTTS TT    EEEE SSHHHHHHHHHHHHHHHTTTT  EEEE HHHHSSS HHHHHHT:    
ExpBur          :eeeeebbebbbebbeeeebbbbbbeeebebebbbbbbbbebbeeeeeeeebbbbbbbeeeebbeebeeebeeebeeeebebbbbbeeebeeeebeeebee:    
Contact         :                         b   b                                                                      

queryA       341:NDIIILTPQILVNNLKKGTIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTDEALDYICKLCASLDASVIA: 440
                :****************************************************************************************************:
5e3h_A_1     111:NDIIILTPQILVNNLKKGTIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTDEALDYICKLCASLDASVIA: 210
SecStr          : SEEEE HHHHHHHHHTTSS  GGG SEEEEETGGG STT HHHHHHHHHHHHHHSS      EEEEEES    TT SSHHHHHHHHHHHHHHTT SEEE:    
ExpBur          :bbbbbbbbebbbebbeeeebebbeebebbbbbbbbbbeeeeebbebbbebbebbeeeeeeeebbbbbbbbbbbbeebeeeeebbeebbbbbbebbbbbbb:    
Contact         :                                b                                    b                              

queryA       441:TVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFL: 540
                :******************************************************         ********************   **************:
5e3h_A_1     211:TVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRDTESLAKRICKDLEXXXXXXXXXFGTQKYEQWIVTVQKACMVFXXXDKDEESRICKALFL: 310
SecStr          :   TTHHHHTTTS   EEEEEE       HHHHHHHHHHHHHHHHHHTTT    ---------  SHHHHHHHHHHHHHHS  ---  SHHHHHHHHHHH:    
ExpBur          :bbeeeeeebeeebeebebeeeebeebeeeebbebbeebbeebeeebeeeeeeee---------eeeeebeeebeeeeeebeee---eeeeeeeebbbbeb:    

queryA       541:YTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALV: 640
                :************************************    ************************************************************:
5e3h_A_1     311:YTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAXXXXEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALV: 410
SecStr          :HHHHHHHHHHHHHHHHHS HHHHHHHHHHHHHHH  ---- THHHHHHHHHHHHHHHHHHHH GGG  HHHHHHHHHHHHHHHH TT  EEEE SSHHHH:    
ExpBur          :bbebbbebbebbebbebbbbebbbeebeebbeebee----eeeeebeebbeebeeebeebeeeeebebebbeebbebbeebbeeeeebbbbbbbeeeebb:    

queryA       641:DALKNWIEGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFL: 740
                :*************************     ****************   ***************************************************:
5e3h_A_1     411:DALKNWIEGNPKLSFLKPGILTGRGXXXXXTGMTLPAQKCILDAFKXXXDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFL: 510
SecStr          :HHHHHHHHT GGGTT  EEEE    -----    HHHHHHHHHTT ---  SEEEE GGGTT       SEEEEES    HHHHHHHGGG  STT EEEE:    
ExpBur          :ebbbebbeebeebeebebbbbbeee-----eebeeeebbebbeebe---eebbbbbbebbbbbeebeebebbbbbbbeeebbebbbbbbbbbeeebebbb:    
Contact         :                                                             b                                      

queryA       741:LTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKE: 840
                :*******************************************************    *****************************************:
5e3h_A_1     511:LTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKILHIQTHEKFIRDSQEXXXXVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKE: 610
SecStr          :EESSSHHHHHHHHHHHHHHHHHHHHHHHHHS TTTHHHHHHHHHHHHHHHHHS  ----    S  EEE TTT  EEEETTTEEEETTTEEEE STTGGG:    
ExpBur          :bbeeeebbeebeebeebbebbeebbeebeeeeeeebeeebeebbeeebeebeeee----eeeeeeeebebbbbbeebbebeebbbbeeeebbbeeeebee:    

queryA       841:CFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE: 922
                :**************************  ************************          ********************:
5e3h_A_1     611:CFVSRPHPKPKQFSSFEKRAKIFCARXXCSHDWGIHVKYKTFEIPVIKIESFXXXXXXXXXXTLYSKWKDFHFEKIPFDPAE: 692
SecStr          :SEEEEE S     TT  EEEEEEE  --   EEEEEEEETTEEEEEE GGG ----------   SSSTT  S   B  S  :    
ExpBur          :ebeeeeeeeeeeeeebebebbbebee--eeeebbeebebeeeebbbbebebb----------eeeebbeebebeeeebeeee:

Input Residue Numbers for Focused Sites

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