[pdbjlvh2]Protein Model on 4on9_B_1_G

Protein Model on 4on9_B_1_G_1 (TEMPLATE: 4on9 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:2] [assembly_id:3]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(RIGI_HUMAN)	B 1 (B)	polymer(polypeptide(L)) [495 aa]	Probable ATP-dependent RNA helicase DDX58 :DDX58_HUMAN
2	b		G 1 (B)	non-polymer(CL)	CHLORIDE ION	742T 744N (identity: 100.0 %/89.7 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:4on9_B_1 identity=89.7%

queryA       242:KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENN: 341
                :*********************************************   *************************************    ***********:
4on9_B_1      29:KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPXXXKGKVVFFANQIPVYEQQKSVFSKYFERHGYRVTGISGXXXXNVPVEQIVENN: 128
SecStr          :   HHHHHHHHHHHTT  EEEE  TTS HHHHHHHHHHHHHT   ---   EEEE SSHHHHHHHHHHHHHHHHTTT  EEEE  ----   HHHHHHH :    
ExpBur          :eeeebbeebbeebeeebbbbbbbeeebebbebbbbbbeebbeeee---ebbbbbbbeeeebbeebeeebbeebeeeebebebbee----eeebeeebeeb:    

queryA       342:DIIILTPQILVNNLKKGTIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTDEALDYICKLCASLDASVIAT: 441
                :*******************************************************  *******************************************:
4on9_B_1     129:DIIILTPQILVNNLKKGTIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGXXSGPLPQVIGLTASVGVGDAKNTDEALDYICKLCASLDASVIAT: 228
SecStr          :SEEEE HHHHHHHHHHTSS  GGG SEEEEETGGG  TT HHHHHHHHHHHHH  --     EEEEEES    TT SSHHHHHHHHHHHHHHTT SEEE :    
ExpBur          :ebbbbbbebbbebbeeeebeebeebebbbbbebeebeeebebbebbbebbebeee--eeeebbbbbbbeebebeebeeeeebbeebbebbbbbbbbbbbe:    

queryA       442:VKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY: 541
                :****************************************************************************************************:
4on9_B_1     229:VKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY: 328
SecStr          :  TTHHHHHHHS   EEEEEE    SS HHHHHHHHHHHHHHHHHHHT HHHHH   SS   TTSHHHHHHHHHHHHHHHH   S HHHHHHHHHHHHHH:    
ExpBur          :beeeeeebeeebeeeeeeeeebeebeebebeebbbebbeebbeebeeebeebeeeeeeeeeebeeeebeebbeebbeebeebeeeeeeebeebbebbebb:    

queryA       542:TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVD: 641
                :****************************************************************************************************:
4on9_B_1     329:TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVD: 428
SecStr          :HHHHHHHHHHHHHHHHS HHHHHHHHHHHHHHHHHS   HHHHHHHHHHHHHHHHHHHHHH GGG  HHHHHHHHHHHHHHHH TT  EEEE S HHHHH:    
ExpBur          :bebbeebbbbbbbbebbbbebbbeebeebbeebeeeeeeeebeebbeebeeebeebeebeeeeebebebbeebbebbeebbeeeeebebebebeeeebbe:    

queryA       642:ALKNWIEGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLL: 741
                :*******************                           **********        ****************             *******:
4on9_B_1     429:ALKNWIEGNPKLSFLKPGIXXXXXXXXXXXXXXXXXXXXXXXXXXXSGDHNILIATXXXXXXXXIAQCNLVILYEYVGNVXXXXXXXXXXXXXGSKCFLL: 528
SecStr          :HHHHHHHH GGGTT  EE ---------------------------    SEEEE --------  SSSEEEEES     -------------  EEEEE:    
ExpBur          :bbeebbeebeebeebebbe---------------------------eeeebbebee--------eeebebebbbbbeeee-------------ebbbbeb:    

queryA       742:TSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKILHIQTHEKFIRDS: 793
                :****************************************************:
4on9_B_1     529:TSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKILHIQTHEKFIRDS: 580
SecStr          :ES HHHHHHHHHHHHHHHHHHHHHHHHHHS HHHHHHHHHHHHHHHHHHHH :    
ExpBur          :beeeeebeeeeeeeeeeebbeebbeebeeeeeeebeeebeebbeeebeeeee:    
Contact         :b b

Protein Model on 4on9_B_1_G_1 (TEMPLATE: 4on9 )

Input Residue Numbers for Focused Sites