[pdbjlvh2]Protein Model on 4ay2_A_1_C

Protein Model on 4ay2_A_1_C_1 (TEMPLATE: 4ay2 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(RIGI_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [628 aa]	PROBABLE ATP-DEPENDENT RNA HELICASE DDX58 :DDX58_HUMAN
2	b		C 1 (A)	non-polymer(ZN)	ZINC ION	810C 813C 864C 869C (identity: 100.0 %/91.7 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:4ay2_A_1 identity=91.7%

queryA       240:PFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVE: 339
                :****************************************************************** *********************************:
4ay2_A_1       2:PFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQNKSVFSKYFERHGYRVTGISGATAENVPVEQIVE: 101
SecStr          :     HHHHHHTHHHHTT  EEEE  TTS HHHHHHHHHHHHHHSS TT    EEEE SSHHHHHHHHHHHHHHTTTTT  EEEE TTS SSS HHHHHH:    
ExpBur          :eeeeeebbebbbeebeeeebbbbbbeeebebebbbbbbbbebbeebeeeeebbbbbbbeeeeebeebeeebeeebeeeeeebebbbeeeeeeeebeeebe:    

queryA       340:NNDIIILTPQILVNNLKKGTIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTDEALDYICKLCASLDASVI: 439
                :****************************************************************************************************:
4ay2_A_1     102:NNDIIILTPQILVNNLKKGTIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTDEALDYICKLCASLDASVI: 201
SecStr          :T SEEEE HHHHHHHHHTTSS  GGG SEEEEETGGG STT HHHHHHHHHHHHHHTT  S   EEEEEES     S  SHHHHHHHHHHHHHHHT  EE:    
ExpBur          :ebbbbbbbbebbbebbeeeebeebeebebbbbbebeebeeeeebbbbbbebbebeeeeeeeeebbbbbbbeebebeebeeeeebbeebbebbbbbbbbbb:    

queryA       440:ATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALF: 539
                :***********************************************************************************       **********:
4ay2_A_1     202:ATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVXXXXXXXEESRICKALF: 301
SecStr          :E   SSHHHHHHT    EEEEEE    S  SHHHHHHHHHHHHHHHHHHH GGGGGS S  S  TTSHHHHHHHHHHHHHS  ------- HHHHHHHHH:    
ExpBur          :bbbeebeeebeeeeeeeeeeeeebeebeeeebeebbbebbeebbebbeeebeebeeebeeeebebbeeebbebbeebbeebee-------eeeeebebbe:    

queryA       540:LYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRAL: 639
                :****************************************************************************************************:
4ay2_A_1     302:LYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRAL: 401
SecStr          :HHHHHHHHHHHHHHHHHHS HHHHHHHHHHHHHHHTTS   HHHHHHHHHHHHHHHHHHHHHT GGG  HHHHHHHHHHHHHHHH TT  EEEE SSHHH:    
ExpBur          :bbbebbeebbbbbbbbebbbbebbbeebeebbeebeeeeeeeebeebbeebeeeeeebbebbeeeebebebbeebbebbeebbeeeeebebbbbbebebb:    

queryA       640:VDALKNWIEGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCF: 739
                :**********************                           **************    ************                 ****:
4ay2_A_1     402:VDALKNWIEGNPKLSFLKPGILXXXXXXXXXXXXXXXXXXXXXXXXXXXGDHNILIATSVADEXXXXAQCNLVILYEYVXXXXXXXXXXXXXXXXXSKCF: 501
SecStr          :HHHHHHHHHT GGGTT  EEE ---------------------------  TT  EEEESS  ----   SEEEEES  ----------------- EEE:    
ExpBur          :bebbeebbeebeebeebbbbee---------------------------eeeeebbbbbeeee----eebebbbebbee-----------------ebbb:    

queryA       740:LLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFK: 839
                :**************************************************************************************** ***********:
4ay2_A_1     502:LLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEDCHYTVLGDAFK: 601
SecStr          :EEES HHHHHHHHHHHHHHHHHHHHHHHHTTS HHHHHHHHHHHHHHHHHHHHHT       B S EEEEETTT  EEEEGGGEEEETTTEEEE SGGGT:    
ExpBur          :bbbeeeeebeeeeeeeeeeebbeebbeebeeeebeebeeebeeebeeebeeeeeeeeeeeeeeeeebbbbbeeeebebbebeebbbbeeeebbbeeeebe:    
Contact         :                                                                      b  b                          

queryA       840:ECFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE: 922
                :***********************************************************************************:
4ay2_A_1     602:ECFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE: 684
SecStr          :TSEEEEE SS    TTEEEEEEEEE STT   EEEEEEEETTEEEEEE GGGEEEEETTT  EE  SSGGG  B  EE  S  :    
ExpBur          :ebbeeeebeeeeeeeebebebbbbbeeeebeeebbbbbebeeeebbbbebebbbbbbeeeeeeeebeebeebebbeeeeeeee:    
Contact         :                        b    b

Protein Model on 4ay2_A_1_C_1 (TEMPLATE: 4ay2 )

Input Residue Numbers for Focused Sites