Protein Model on 4a36_B_1_F_1
(TEMPLATE: 
4a36
)Protein Model on 4a36_B_1_F_1
(TEMPLATE: 4a36
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DOWNLOAD: [sequence-replaced 3D model]
[for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(RIGI_HUMAN) | B 1 (B) | polymer(polypeptide(L)) [523 aa] | RETINOIC ACID INDUCIBLE PROTEIN I :D3TI84_ANAPL | |
| 2 | b | F 1 (U) | polymer(polyribonucleotide) | 5'-R(*UP*CP*AP*AP*AP*CP*AP*GP*AP*GP*GP*UP*CP*GP *CP*AP*UP*GP*C)-3' | 298N(T) 299Q(K) 300I(V) 301P 325S 326G 329A(F) 347T 349Q 350I 353N 510E 511Q(H) 514V 518K(R) 546R 635K 636T 637R 662T(M) 663G 664R 697T 698S 699V (identity: 72.0 %/56.6 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:4a36_B_1 identity=56.6% |
queryA 242:KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENN: 341
:* * ** *** ** *** ****** ****** ****** * * * **** * ******* ** *** ** * **** ** ** * :
4a36_B_1 7:KARSYQIELAQPAINGKNALICAPTGSGKTFVSILICEHHFQNMPAGRKAKVVFLATKVPVYEQQKNVFKHHFERQGYSVQGISGENFSNVSVEKVIEDS: 106
SecStr : HHHHHHHHHHHTT EEEE TTS HHHHHHHHHHHHHTT SS EEEE SSHHHHHHHHHHHHHHHTTTT EEEE TTTGGGS HHHHHHH :
ExpBur :eeeebbebbbebbeeebbbbbbbebebebeebbbbbbeebbeebeeeeebbbbbbbbebbbbebbbeebeeebeeeebebebbbeeeeeeeebeebbeeb:
Contact : bbbb bb b
queryA 342:DIIILTPQILVNNLKKGTIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTDEALDYICKLCASLDASVIAT: 441
:*** ******* ** **************** **** * ** ** * *** ********* *** * ** ** ** * *:
4a36_B_1 107:DIIVVTPQILVNSFEDGTLTSLSIFTLMIFDECHNTTGNHPYNVLMTRYLEQKFNSAS-QLPQILGLTASVGVGNAKNIEETIEHICSLCSYLDIQAIST: 205
SecStr :SEEEE HHHHHHHHHTSS GGG SEEEETTGGG TTSHHHHHHHHHHHHHHHT S- EEEEEES TT SSHHHHHHHHHHHHHHTT SEEE :
ExpBur :bbbbbbbebbbebbeeeebeebeebbbbbbbbbbebeeeeebbebbeebbebeeeeee-ebbbbbbbbbbbbbeebeeeeebbeebbebbbebbbebbbb:
Contact : b bb b
queryA 442:VKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY: 541
:* * ** ** * * ** * ** ** ** * * **** ** *** * * **** *** :
4a36_B_1 206:VRENIQELQRFMNKPEIDVRLVKRRIHNPFAAIISNLMSETEALMRTI-YSXXXXXXXXXXXFGTQNYEHWIVVTQRKCRXXXXXXXXXXSRICRALFIC: 304
SecStr : TTHHHHHHH B B S HHHHHHHHHHHHHHHHHHTT- ----------- SHHHHHHHHHHHHHT ---------- TTHHHHHHH:
ExpBur :beeeeeebeeebeeeebeeeebeeeeeeebeebbeebbeebeeebeee-ee-----------eeeeebeeebeebeeebe----------eeeeebbebb:
Contact : bb b b
queryA 542:TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVD: 641
:* ************* ** *** ** ** ** * ** ** * ** ** * * ******* * ** * ** * * ** ****** :
4a36_B_1 305:TEHLRKYNDALIISEDARIIDALSYLTEFFTNVKNGPYTELEQHLTAKFQEKEPELIALSKDETNENPKLEELVCILDDAYRYNPQTRTLLFAKTRALVS: 404
SecStr :HHHHHHHHHHHHHHTTS HHHHHHHHHHHHSHHHHS HHHHHHHHHHHHSHHHHHHHHT SSSS HHHHHHHHHHHHHHTT TT EEEE SSHHHHH:
ExpBur :bebbeebbbbbeebeebbbebbbeebeebbeebeeeeeeebbeebbeebeeeeeebeebbeeeebebbbbeebbebbbebbeeeeebbbbbbbeeeebbe:
Contact : b bbb
queryA 642:ALKNWIEGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLL: 741
:*** * ** * *** * *** **** ** ***** * * ************* ***** **** *** **** ****** **** * :
4a36_B_1 405:ALKKCMEENPILNYIKPGVLMGRGXXXXXXXMTLPSQKGVLDAFKTSKDNRLLIATSVADEGIDIVQCNLVVLYEYSGNVTKMIQVRGRGRAAGSKCILV: 504
SecStr :HHHHHHHT TTTTTS EEEE ------- HHHHHHHHHHHHH SSS EEEE GGGGSS TT EEEEES TTHHHHTGGG SS EEEEE:
ExpBur :bbeebbeeeeebeebebbbbbeee-------eebeebeeebeebeeeeebbbbbbbebbbbbbebeebebbbbbbbebebbebbbbbbbbbeeeeebbbb:
Contact : bbb bbb
queryA 742:TSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKILHIQTHEKFIRD: 792
:** * * * * *** *** * *** * ** * * **:
4a36_B_1 505:TSKTEVVENEKCNRYKEEMMNKAVEKIQKWDEETFAKKIHNLQMKERVLRD: 555
SecStr :B HHHHHHHHHHHHHHHHHHHHHHHHTTS HHHHHHHHHHHHTTS :
ExpBur :bbeeebbeebeebeeebebbeebbeebeeeeeeebeeebeebbeeeeeeee:
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[assembly_id:2]
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