[pdbjlvh2]Protein Model on 4a2w_A

Protein Model on 4a2w_A_1 (TEMPLATE: 4a2w )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description
1	a	A(RIGI_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [678 aa]	RETINOIC ACID INDUCIBLE PROTEIN I :D3TI84_ANAPL

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:4a2w_A_1 identity=51.3%

queryA         2:TTEQRRSLQAFQDYIRKTLDPTYILSYMAPWFREEEVQYIQAEKNNKGPMEAATLFLKFLLELQEEGWFRGFLDALDHAGYSGLYEAIESWDFKKIEKLE: 101
                :*    ****    **   * * * *  *  *    *           *   ** ***   * *   ***** ***   *** ** **** *** * ****:
4a2w_A_1       5:TADEKRSLQCYRRYIERSLNPVYVLGNMTDWL-PDELRERIRKEEERGVSGAAALFLDAVLQLEARGWFRGMLDAMLAAGYTGLAEAIENWDFSKLEKLE: 103
SecStr          : HHHHHHHHHTHHHHHTT  GGGTSTT TTTS- TTHHHHHHHHHTT HHHHTTTTTHHHHT  STTHHHHHHHHHHHHT HHHHHHHHTT  HHHHHHH:    
ExpBur          :eeeebeebeeebebbeebbbbbbbbeebeeeb-eeebbeebeeeeeeebeebbeebbebbbebeeeebbebbbebbeebbbeebbebbeeeebeebeebb:    

queryA       102:EYRLLLKRLQPEFKTRIIPTDIISDLSECLINQECEEILQICSTKGMMAGAEKLVECLLRSDKENWPKTLKLALEKE-RNKFSELWIVEKGIKDVETEDL: 200
                :  * ****          *   *   * ***  ***** **       **  ** *** ***** *** * ***        ****              :
4a2w_A_1     104:LHRQLLKRIEATM-LEVDPVALIPYISTCLIDRECEEIQQISENRSKAAGITKLIECLCRSDKEHWPKSLQLALDTTGYYRASELW--------------: 188
SecStr          :HHHHHHHHHHHHH-TTS HHHHTTTTTTTS HHHHHHHHHHHHHT HHHHHHHHHHHHHS   TTHHHHHHHHHHHTT HHHHHTT--------------:    
ExpBur          :eebebbebbbbbb-bebebeebbeebeebbbeebbeebeebbeeebebbbbebbbebbbbbbbeebbebbbebbeeebeeebbebb--------------:    

queryA       201:EDKMETSDIQIFYQEDPECQNLSENSCPPSEVSDTNLYSPF-----------------------------------------------------------: 241
                :                                                                                                    :
4a2w_A_1     189:-----------------------------------------DXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX: 247
SecStr          :----------------------------------------- ----------------------------------------------------------:    
ExpBur          :-----------------------------------------e----------------------------------------------------------:    

queryA       242:KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENN: 341
                :* * ** *** **  ***  ****** ****** ******    * * * **** *   ******* **   *** ** * ****       **   *  :
4a2w_A_1     248:KARSYQIELAQPAINGKNALICAPTGSGKTFVSILICEHHFQNMPAGRKAKVVFLATKVPVYEQQKNVFKHHFERQGYSVQGISGEXXXXXSVEKVIEDS: 347
SecStr          :   HHHHHHHHHHHTT  EEEE  TTS HHHHHHHHHHTTTTT  SS    EEEE SSHHHHHHHHHHHHHHHHTTT  EEEE   -----  HHHHHH :    
ExpBur          :ebeebbeebbebbeeeebbbbbbeeebebeebbbbbbeebbeebeeeeebbbbbbbbeeebbeebeeebeeebeeeeeebeebeee-----ebeeebeeb:    

queryA       342:DIIILTPQILVNNLKKGTIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTDEALDYICKLCASLDASVIAT: 441
                :***  *******    **  ****************   ****  *  ** **   *   ***  ********* ***  *    ** **  **   * *:
4a2w_A_1     348:DIIVVTPQILVNSFEDGTLTSLSIFTLMIFDECHNTTGNHPYNVLMTRYLEQKF-NSASQLPQILGLTASVGVGNAKNIEETIEHICSLCSYLDIQAIST: 446
SecStr          :SEEEE HHHHHHHHHSSS   GGG SEEEEETGGG STT HHHHHHHHHHHHHH-TT S   EEEEEES    TT  SHHHHHHHHHHHHHHHT SEEE :    
ExpBur          :ebbbbbbebbbebbeeeebeebeebbbbbbbebeebeeeebbbebbeebbebee-eeeeeebbbbbbbeebebeebeeeeebbeebbebbbebbbebbbb:    

queryA       442:VKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY: 541
                :*  *  **     **    * *  **   *  **  **  ** *   *              **** ** ***  *  *   *  ** ****** ***  :
4a2w_A_1     447:VRENIQELQRFMNKPEIDVRLVKRRIHNPFAAIISNLMSETEALMRTI-XXXXXXXXXXXXDFGTQNYEHWIVVTQRKCRLLQLEDKEEESRICRALFIC: 545
SecStr          :  SSHHHHHHHS    EEEEE    S  HHHHHHHHHHHHHHHHHHH -------------  SSHHHHHHHHHHHHHHHH   S HHHHHHHHHHHHHH:    
ExpBur          :beeeeeebeeebeebebeeeebeebeebebbebbeebbeebbeebeee-------------eeeeeebbeebeebbeebeeeeeeeeeebeeebbbbbbb:    

queryA       542:TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVD: 641
                :* ************* **  *** **  ** **      * ** **  * **  **   * *  ******* *  **   *  ** * * ** ****** :
4a2w_A_1     546:TEHLRKYNDALIISEDARIIDALSYLTEFFTNVKNGPYTELEQHLTAKFQEKEPELIALSKDETNENPKLEELVCILDDAYRYNPQTRTLLFAKTRALVS: 645
SecStr          :HHHHHHHHHHHHHHHHS HHHHHHHHHHHHHHHHHTT  HHHHHHHHHHHHHHHHHHHHHTSTT   HHHHHHHHHHHHTTTS TT  EEEEESSHHHHH:    
ExpBur          :bbbbbbbbbbbbbbebbbbebbbebbeebbebbeebeeeebbeebbeebeeeeeebeebbeeeebebebbeebbebbbebbeeeeebebbbbbbbebbbe:    

queryA       642:ALKNWIEGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLL: 741
                :***   * ** *   *** *                            *   ******      * ***** **** *** ****        **** * :
4a2w_A_1     646:ALKKCMEENPILNYIKPGVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXDNRLLIATSVXXXXXXIVQCNLVVLYEYSGNVTKMIQVXXXXXXXGSKCILV: 745
SecStr          :HHHHHHHH STTSS   EE ----------------------------  SEEEEE  ------    SEEEEES  S SHHHH  -------   EEEE:    
ExpBur          :bbeebbeebeebeebebbee----------------------------eeebebbeee------eeeeebbbbbbeeeebeebbee-------eeebbbb:    

queryA       742:TSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKILHIQTHEKFIRDS: 793
                :**   * * *  * *** ***      * ***  *  **   *  *   ***:
4a2w_A_1     746:TSKTEVVENEKCNRYKEEMMNKAVEKIQKWDEETFAKKIHNLQMKERVLRDS: 797
SecStr          :ES HHHHHHHHHHHHHHHHHHHHHHHHHTS HHHHHHHHHHHHHHHHHTT  :    
ExpBur          :bbeeebbeebeeeeeeeebbeebbeebbeeeeeebeeebeebbeeebeeeee:

Protein Model on 4a2w_A_1 (TEMPLATE: 4a2w )

Input Residue Numbers for Focused Sites