Protein Model on 5vyb_A_1_F_1 (TEMPLATE: 5vyb )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(KLRD1_HUMAN) A 1 (A) polymer(polypeptide(L)) [143 aa] C-type lectin domain family 6 member A :CLC6A_HUMAN
2 b F 1 (A) non-polymer(PEG) DI(HYDROXYETHYL)ETHER 158N(T) (identity: 0.0 %/26.9 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:5vyb_A_1 identity=26.9%
queryA        61:CQEKWVGYRCNCYFISSEQKTWNESRHLCASQKSSLLQLQNTDELDFMSS--SQQF-YWIGLSYSEEHTAWLWENGSALSQYLF------PSFETFNTKN: 151
                :*   *      ******* * *  *   *      *       *  *        * *  ***       * *                 *         :
5vyb_A_1      17:CPASWKSFGSSCYFISSEEKVWSKSEQNCVEMGAHLVVFNTEAEQNFIVQQLNESFSYFLGLSDPQGNNNWQWIDKTPYEKNVRFWHLGEPNHSAEQCAS: 116
SecStr          :EETTSEEETTEEEEEEEEEE HHHHHHHHHHTT EE    SHHHHHHHHTTS TTS EEEEEE TTSSS  EETT   STTS   B TT S  TT  EEE:    
ExpBur          :beeebeeeeebbbeebeeebebeebbeebeeeebebbbbeeeebbeebbeebeeeebbbbbbbbeeeeeebebeeeeebeebeeebbeebeeeeeeebbb:    
Contact         :                                                                                    bb              

queryA       152:CIAYNPNGNAL-DESCEDKNRYICKQQLI: 179
                :     * *    *  **     **    *:
5vyb_A_1     117:IVFWKPTGWGWNDVICETRRNSICEMNKI: 145
SecStr          :EEEETTTEEEEEEE TTS EEEEEEEE E:    
ExpBur          :bbeeeeebbbbbbbebeeeebbbbbbebe:    
Contact         :      b                                                                                             


Input Residue Numbers for Focused Sites

ex) 2,15,123