Protein Model on 4pdc_A_1_E_1
(TEMPLATE: 
4pdc
)Protein Model on 4pdc_A_1_E_1
(TEMPLATE: 4pdc
)| CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model]
[for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(KLRD1_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [123 aa] | NKG2-D type II integral membrane protein :NKG2D_HUMAN | |
| 2 | b | E 1 (E) | polymer(polypeptide(L)) [150 aa] | CPXV018 protein :Q8QN43_COWPX | 109S(K) 110S(L) 112Q(K) 113Q(S) 114F(Y) 144F(I) 145E 147F(M) 148N(Q) 149T(K) 162L(Y) 164E (identity: 16.7 %/33.6 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:4pdc_A_1 identity=33.6% |
queryA 55:DSDCCSCQEKWVGYRCNCYFISSEQKTWNESRHLCASQKSSLLQLQNTDELDFMSSSQQFYWIGLSYSEEHTAWLWENGSALSQYLFPSFETFNTKNCIA: 154
: * * * * * *** * * * ** * ** *** * * ** * ** ** ** * * * :
4pdc_A_1 1:ESYCGPCPKNWICYKNNCYQFFDESKNWYESQASCMSQNASLLKVYSKEDQDLLKLVKSYHWMGLVHIPTNGSWQWEDGSILSPNLLTIIE-MQKGDCAL: 99
SecStr : S TTSEEETTEEEEEEEEEE HHHHHHHHHTTT EEB TTTTGGGGG S EEBSEEE TTT EEETTS B TTS EEE - SSSSEEE:
ExpBur :eeeeeeeeeebeeeeebbbeebeeeeebeebeebbeeeebebbbbebeeebeebeebeeebbbbbeeeeeeeebebeeeeeeeeebbeeee-eeeeebbb:
Contact : bb bbb bb bbb
queryA 155:YNPNGNALDESCEDKNRYICKQQ: 177
:* * * * *** * :
4pdc_A_1 100:YASSFKGYIENCSTPNTYICMQR: 122
SecStr :EETTTEEEEE TTS EEEEEEE :
ExpBur :bbeebebbbbebeeebebbbbbe:
Contact : b b
|
[assembly_id:1]
[help]