Protein Model on 1kcg_A_1_C_1 (TEMPLATE: 1kcg )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(KLRD1_HUMAN) A 1 (A) polymer(polypeptide(L)) [122 aa] NKG2-D type II integral membrane protein :NKG2D_HUMAN
2 b C 1 (C) polymer(polypeptide(L)) [170 aa] ULBP3 protein :N2DL3_HUMAN 112Q(K) 114F(Y) 142P(T) 144F(I) 145E 147F(M) 158N(S) 160N(K) 162L(Y) 163D(I) 164E (identity: 18.2 %/33.9 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:1kcg_A_1 identity=33.9%
queryA        56:SDCCSCQEKWVGYRCNCYFISSEQKTWNESRHLCASQKSSLLQLQNTDELDFMSSSQQFYWIGLSYSEEHTAWLWENGSALSQYLFPSFETFNTKNCIAY: 155
                :* *  *   *  *  ***    * * * **   * **  ***        *         * **        * ** ** **  *    *      *  *:
1kcg_A_1       2:SYCGPCPKNWICYKNNCYQFFDESKNWYESQASCMSQNASLLKVYSKEDQDLLKLVKSYHWMGLVHIPTNGSWQWEDGSILSPNLLTIIE-MQKGDCALY: 100
SecStr          :       TT EEETTEEEEEEEEEE HHHHHHHHHTTT BS     TTTTGGGGT  SEEE SEEEETTTTEEEETTS B  SSS EEE -  S  EEEE:    
ExpBur          :eeebeeeeebeeeeebbbeeeeeebbbeebeebbeeeebebbebebeeebebbeebeeebbbbbebeeeeeebebeeeeebeeebbebee-eeebebbbb:    
Contact         :                                                        b b                           b bb b        

queryA       156:NPNGNALDESCEDKNRYICKQQ: 177
                :        * *   * *** * :
1kcg_A_1     101:ASSFKGYIENCSTPNTYICMQR: 122
SecStr          :ETTTEEEEE TTS EEEEEEEE:    
ExpBur          :beebebebeebeeebbbbbbbe:    
Contact         :  b b bbb                                                                                           


Input Residue Numbers for Focused Sites

ex) 2,15,123