Protein Model on 8k53_B_1_E_1 (TEMPLATE: 8k53 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)		 type description a(query A)
1 a A(BASI_HUMAN) B 1 (B) polymer(polypeptide(L)) [573 aa] Contactin-2 :CNTN2_HUMAN
2 b E 1 (E) branched(oligosaccharide) 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose 268N 275F(T) 278S(P) (identity: 33.3 %/32.0 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:8k53_B_1 identity=32.0%
queryA        29:PLSQQRWVGGSVELHCEAVGSPVPEIQWWFEGQGPNDTCSQLWDGARLDRVHIHATYHQHAASTISIDTLVEEDTGTYECRASNDPDRNHLTRAPRVKWV: 128
                :*      **  * * * * * *** * *           *  *  *                 *  *     ** ***** * *   *   *   *   *:
8k53_B_1     216:PAETYALVGQQVTLECFAFGNPVPRIKW----RKVDGSLSPQWTTAE---------------PTLQIPSVSFEDEGTYECEAENSKGRD--TVQGRI-IV: 293
SecStr          : SEEEEETT  EEEE EEEEES  EEEE----EETTS   TTS   S---------------SEEEESS  GGG EEEEEEEEETTEEE--EEEEEE-EE:    
ExpBur          :eeeeebeeeeebebbbbbebbeebebeb----ebeeeebeeeeeeee---------------ebbebeebeeebebebbbbbebeeeee--ebebeb-bb:    

queryA       129:RAQAVVLVLEPGTVFTTVEDLGSKILLTCSLNDSATEVTGHRWLKGGVVL----KEDALPGQKTEFKVDSDDQWGEYSCVFLPEPMGTA------NIQLH: 218
                : **   *         *  * **     *            ***  *  *        * *     *    *  * * **      **         *  :
8k53_B_1     294:QAQPEWLKV----ISDTEADIGSNLRWGCAAAGKPRPTV--RWLRNGEPLASQNRVEVLAGDLRFSKLSLEDS-GMYQCV-AENKHGTIYASAELAVQAL: 385
SecStr          :E   EEEE ----   EEEETT EEEEE EEE SS  EE--EEEETTEE  SBTTEEEETTEEEEES  TT  -EEEEEE-EEETTEEEEEEEEEEEE E:    
ExpBur          :beebeeeee----beeeebebeeebebebeeeeeeeeee--ebbeeeeebeeeeebeeeebebebeebeeebe-bbbbbb-bebeeeeeebebbbebeee:    

queryA       219:GPP-RVKAVKSSEHINEGETAMLVCKSESVPPVTDWAWYKITDSEDKALMNGSESRFFVSSSQGRSELHIENLNMEADPGQYRCNGTSSKGSDQAIITLR: 317
                : *  *   *        *      *     *      * * *      * *   **  *        * * *     * * * *      *       * :
8k53_B_1     386:APDFRLNPVRRLIPAARGGEILIPCQPRAAPKAV-VLWSKGTE----ILVNS--SRVTVTPD---GTLIIRNIS-RSDEGKYTCFAENFMGKANSTGILS: 474
SecStr          :EEE SSS   SEEEEETT  EEE    EEES  E-EEEEETTE----E    --SSEEE TT---S EEE S  -GGG EEEEEEEEETTEEEEEEEEEE:    
ExpBur          :ebebeeeebeeebebeeeeebebebeeebbeeee-eebbeeee----eeeee--eebbeeee---bbbbbeebe-eebeeebbbebebeeeeeebebebe:    
Contact         :                                                  b      b  b                                       

queryA       318:VR: 319
                :**:
8k53_B_1     475:VR: 476
SecStr          :EE:    
ExpBur          :be:

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