[pdbjlvh2]Protein Model on 8k53_A_1_B

Protein Model on 8k53_A_1_B_1 (TEMPLATE: 8k53 )

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(BASI_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [777 aa]	Contactin-2 :CNTN2_HUMAN
2	b		B 1 (B)	polymer(polypeptide(L)) [573 aa]	Contactin-2 :CNTN2_HUMAN	135L 161D(G) 164T(R) 228S(R) 229S(L) 319R (identity: 33.3 %/32.5 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:8k53_A_1 identity=32.5%

queryA        36:VGGSVELHCEAVGSPVPEIQWWFEGQGPNDTCSQLWDGARLDRVHIHATYHQHAASTISIDTLVEEDTGTYECRASNDPDRNHLTRAPRVKWVRAQAVVL: 135
                :**  * * * * * *** * *           *  *  *                 *  *     ** ***** * *   *   *   *   * **   *:
8k53_A_1     223:VGQQVTLECFAFGNPVPRIKW----RKVDGSLSPQWTTAE---------------PTLQIPSVSFEDEGTYECEAENSKGRD--TVQGRII-VQAQPEWL: 300
SecStr          :TT  EEEE EEEEES  EEEE----EETTS   TTT   S---------------SEEEESS  GGG EEEEEEEEETTEEE--EEEEEEE-EE   EEE:    
ExpBur          :eeeebebbbbbbbbeebebeb----ebeeeeeeeeeeeee---------------eebebeebeeebebebbbbbebeeeee--ebebebb-bbbebeee:    
Contact         :                                                                                                   b

queryA       136:VLEPGTVFTTVEDLGSKILLTCSLNDSATEVTGHRWLKGGVVL----KEDALPGQKTEFKVDSDDQWGEYSCVFLPEPMGTAN------IQLHGPP-RVK: 224
                :         *  * **     *            ***  *  *        * *     *    *  * * **      **         *   *  *  :
8k53_A_1     301:KV----ISDTEADIGSNLRWGCAAAGKPRPTV--RWLRNGEPLASQNRVEVLAGDLRFSKLSLEDS-GMYQCV-AENKHGTIYASAELAVQALAPDFRLN: 392
SecStr          :E ----   EEEETT EEEEE EEE SS  EE--EEEETTEE    SS EEETTEEEEES  TT  -EEEEEE-EEETTEEEEEEEEEEEE    B SSS:    
ExpBur          :ee----beeeebebeeebebebeeebeeeeeb--ebbbeeeebeeeebbeeeebebebbebeeebe-bbbbbb-bebeeeebbbebbbebeeeebebeee:    
Contact         :                         b  b                                                                       

queryA       225:AVKSSEHINEGETAMLVCKSESVPPVTDWAWYKITDSEDKALMNGSESRFFVSSSQGRSELHIENLNMEADPGQYRCNGTSSKGSDQAIITLRVR: 319
                : *        *      *     *      * * *      * *   **  *        * * *     * * * *      *       * **:
8k53_A_1     393:PVRRLIPAARGGEILIPCQPRAAPKAV-VLWSKGTE----ILVN--SSRVTVTPD---GTLIIRNIS-RSDEGKYTCFAENFMGKANSTGILSVR: 476
SecStr          :   SB  EETTSEEEE    B SS  E-EEEEETTE----E   -- SS EE TT---  EEEES  -GGG EEEEEEEEETTEEEEEEEEE EE:    
ExpBur          :ebeeebebeeeeebebebeeebbeebe-bebbeeee----eeee--eeebeeeee---bbbebeebe-eebeeebbbebebeeeebebebebebe:    
Contact         :   bb                                                                                         b

Protein Model on 8k53_A_1_B_1 (TEMPLATE: 8k53 )

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