[pdbjlvh2]Protein Model on 8a0y_B_1_I

Protein Model on 8a0y_B_1_I_1 (TEMPLATE: 8a0y )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(BASI_HUMAN)	B 1 (B)	polymer(polypeptide(L)) [574 aa]	Contactin-2 :CNTN2_MOUSE
2	b		I 1 (I)	branched(oligosaccharide)	beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose	270S(N) 275F(T) 278S(L) (identity: 0.0 %/32.1 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:8a0y_B_1 identity=32.1%

queryA        36:VGGSVELHCEAVGSPVPEIQWWFEGQGPNDTCSQLWDGARLDRVHIHATYHQHAASTISIDTLVEEDTGTYECRASNDPDRNHLTRAPRVKWVRAQAVVL: 135
                :**  * * * * * *** * *           *  *  *                 *  *     ** ***** * *   *   *   *   * **   *:
8a0y_B_1     229:VGQQVTLECFAFGNPVPRIKW----RKVDGSLSPQWGTAE---------------PTLQIPSVSFEDEGTYECEAENSKGRD--TVQGRI-IVQAQPEWL: 306
SecStr          :TT  EEEE EEE SS  EEEE----EETTB   SSS   S---------------SEEEESS  STT EEEEEEEEETTEEE--EEEEEE-EEE   EEE:    
ExpBur          :eeeebebbbbbbbeeebebeb----ebeeeeebeeeeeee---------------bebebeebeeebeeebbbbbebeeeee--ebebeb-bbbbebeee:    

queryA       136:VLEPGTVFTTVEDLGSKILLTCSLNDSATEVTGHRWLKGGVVL----KEDALPGQKTEFKVDSDDQWGEYSCVFLPEPMGTA------NIQLHGPP-RVK: 224
                :         *  * **     *            ***  *  *        * *     *    *  * * **      **         *   *  *  :
8a0y_B_1     307:KV----ISDTEADIGSNLRWGCAAAGKPRPMV--RWLRNGEPLASQNRVEVLAGDLRFSKLNLEDS-GMYQCV-AENKHGTIYASAELAVQALAPDFRQN: 398
SecStr          :E ----   EEEETT  EEEE EEE SS  EE--EEEESSSB    SSEEEETTEEEESS  GGG -EEEEEE-EEETTEEEEEEEEEEEE    B SSS:    
ExpBur          :ee----beeeebeeeeebebebebeeeeebeb--ebbeebeebeeeeebeeeebebebeebeeebe-bbbbbb-bebeeebebbebbbbbebeebbbeee:    

queryA       225:AVKSSEHINEGETAMLVCKSESVPPVTDWAWYKITDSEDKALMNGSESRFFVSSSQGRSELHIENLNMEADPGQYRCNGTSSKGSDQAIITLRVR: 319
                : *        *      *     *  *   * * *         *   *  *        * * *     * * * *      *       * **:
8a0y_B_1     399:PVRRLIPAARGGEISIPCQPRAAPKAT-ILWSKGTE------ILGNSTRVTVTLD---GTLIIRNIS-RSDEGKYTCFAENFMGKANSTGILSVR: 482
SecStr          :   SEEE  TT  EEE    B SS  E-EEEEETTE------E    SSEEE SS---S EEE S  -TTS EEEEEEEE SS EEEEEEEEE  :    
ExpBur          :ebeeebebbeeeebebebebeeebebe-eebbeeee------ebeeeeebbeeee---bbbbbeebb-eebeeebbbebebeeeebebebebbbe:    
Contact         :                                             b    b  b

Protein Model on 8a0y_B_1_I_1 (TEMPLATE: 8a0y )

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